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sw_6_scaffold_3

Search features with annotation key words

Displaying items 61-90 of 151 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_3_61
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

50562..50993
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XBL3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY59120.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
hypothetical protein
sw_6_scaffold_3_trna_1
unknown

Not on your lists

51052..51124
DNA (73bp)
transferRNA
sw_6_scaffold_3_62
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(51153..52196)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNQ7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24881.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_3_63
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(52249..53322)
DNA (1074bp) protein (358aa)
Squalene/phytoene synthase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0P9_HALMD
squalene/phytoene synthase
Squalene/phytoene synthase {ECO:0000313|EMBL:ACV47031.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohata
sw_6_scaffold_3_64
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

53440..54108
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CX78_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26484.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
HAD superfamily hydrolase
sw_6_scaffold_3_65
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

54164..55087
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A1N6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59218.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
phosphotransferase
sw_6_scaffold_3_66
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

55127..56626
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNC1_NATM8
hypothetical protein
UCP012666 family protein {ECO:0000313|EMBL:CCQ35418.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
sw_6_scaffold_3_67
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(56628..57491)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y8U4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY69338.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
hypothetical protein
sw_6_scaffold_3_68
unknown

Not on your lists

57584..57760
DNA (177bp) protein (59aa)

This feature has no annotations

sw_6_scaffold_3_69
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(57792..58409)
DNA (618bp) protein (206aa)
30S ribosomal protein S7 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS7_NATPD
rps7; 30S ribosomal protein S7P
30S ribosomal protein S7 {ECO:0000255|HAMAP-Rule:MF_00480}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
sw_6_scaffold_3_70
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(58406..58870)
DNA (465bp) protein (155aa)
30S ribosomal protein S12 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XU20_NATM8
rps12; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;
sw_6_scaffold_3_71
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(58925..59137)
DNA (213bp) protein (71aa)
Transcription elongation factor NusA-like protein {ECO:0000313|EMBL:AKH97003.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" so
NusA family KH domain protein
NusA family KH domain-containing protein, archaeal; K02600 N utilization substance protein A id=24620759 bin=Halonotius_J07HN6 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halonotius_J07HN6
sw_6_scaffold_3_72
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(59134..59658)
DNA (525bp) protein (175aa)
Transcription elongation factor NusA-like protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N816_9EURY
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
transcription elongation factor NusA
sw_6_scaffold_3_73
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(59729..62398)
DNA (2670bp) protein (890aa)
DNA-directed RNA polymerase subunit A'' (Intein-containing) {ECO:0000313|EMBL:CAI48149.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI48149.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Haloba
rpoA2; DNA-directed RNA polymerase subunit A (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'' (Subunit C) (Intein-containing) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN1_NATPD
sw_6_scaffold_3_74
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(62391..65348)
DNA (2958bp) protein (986aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halop
DNA-directed RNA polymerase subunit A' (EC:2.7.7.48)
DNA-directed RNA polymerase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D4N2_HALXS
sw_6_scaffold_3_75
Halobacteriaceae archaeon YC89, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(65350..67176)
DNA (1827bp) protein (609aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1126241 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
rpoB1; DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
RNA polymerase subunit B n=1 Tax=Natronoarchaeum philippinense RepID=V5RN55_9EURY
sw_6_scaffold_3_76
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(67178..68740)
DNA (1563bp) protein (521aa)
rpoB2; DNA-directed RNA polymerase subunit beta'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:CAI48146.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI48146.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA-directed RNA polymerase subunit B n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN4_NATPD
sw_6_scaffold_3_77
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(68742..68969)
DNA (228bp) protein (76aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natria
DNA-directed RNA polymerase subunit H n=2 Tax=Halovivax RepID=L0I8G3_HALRX
DNA-directed RNA polymerase, subunit H, RpoH/RPB5
sw_6_scaffold_3_trna_2
unknown

Not on your lists

69209..69281
DNA (73bp)
transferRNA
sw_6_scaffold_3_78
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

69632..70201
DNA (570bp) protein (190aa)
Receiver box response regulator n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUS5_NATPD
response regulator
Receiver box response regulator {ECO:0000313|EMBL:CAI48105.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas phara
sw_6_scaffold_3_79
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(70178..70537)
DNA (360bp) protein (120aa)
Putative fluoride ion transporter CrcB n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLA3_NATM8
crcB2; homolog to CrcB protein
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natrono
sw_6_scaffold_3_80
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(70534..70899)
DNA (366bp) protein (122aa)
Putative fluoride ion transporter CrcB 1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=CRCB1_NATPD
crcB_2; protein crcB homolog 2
Putative fluoride ion transporter CrcB 1 {ECO:0000255|HAMAP-Rule:MF_00454}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natro
sw_6_scaffold_3_81
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(70920..71924)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GV99_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ75488.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
hypothetical protein
sw_6_scaffold_3_82
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

71998..72441
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUS8_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48102.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_6_scaffold_3_83
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(72428..73939)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWE0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27495.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_3_84
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(73991..74284)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Haladaptatus paucihalophilus RepID=UPI00036D81EF
Uncharacterized protein {ECO:0000313|EMBL:EFW90717.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
sw_6_scaffold_3_85
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(74344..75084)
DNA (741bp) protein (247aa)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VX18_9EURY
protein-L-isoaspartate(D-aspartate) O-methyltransferase
Protein-L-isoaspartate(D-aspartate) O-methyltransferase {ECO:0000313|EMBL:AGN01760.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source
sw_6_scaffold_3_86
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(75106..75975)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0J143_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA01749.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC 3596
hypothetical protein
sw_6_scaffold_3_87
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(75975..77009)
DNA (1035bp) protein (345aa)
DNA repair and recombination protein RadA n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITK3_NATPD
radA; DNA repair and recombination protein RadA
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natr
sw_6_scaffold_3_88
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(77111..77746)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XN29_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35300.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
Displaying items 61-90 of 151 in total

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