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sw_6_scaffold_3

Search features with annotation key words

Displaying items 91-120 of 151 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_3_89
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(77746..78624)
DNA (879bp) protein (293aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
htpX1; heat shock protein HtpX (EC:3.4.24.-)
Protease HtpX homolog n=1 Tax=Haloarcula japonica DSM 6131 PF0_HALJP">RepID=M0LPF0_HALJP
sw_6_scaffold_3_90
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(78668..80020)
DNA (1353bp) protein (451aa)
Peptide ABC transporter ATPase n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PNG9_9EURY
Peptide ABC transporter ATPase {ECO:0000313|EMBL:EMA71548.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 139
peptide ABC transporter ATPase
sw_6_scaffold_3_91
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(80013..81056)
DNA (1044bp) protein (348aa)
Peptide ABC transporter ATPase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWK7_9EURY
Peptide ABC transporter ATPase {ECO:0000313|EMBL:EMA50107.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
dppD; ABC-type transport system ATP-binding protein (probable substrate dipeptide/oligopeptide/nickel)
sw_6_scaffold_3_92
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(81060..82256)
DNA (1197bp) protein (399aa)
binding-protein-dependent transporters inner membrane component; K02034 peptide/nickel transport system permease protein id=24641593 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:ERH11644.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halop
binding-protein-dependent transporters inner membrane component
sw_6_scaffold_3_93
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(82256..83230)
DNA (975bp) protein (325aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXV2_9EURY
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:ELZ26724.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometric
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
sw_6_scaffold_3_94
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(83266..85167)
DNA (1902bp) protein (634aa)
Extracellular solute-binding protein family 5 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ML79_9EURY
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:EMA45484.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
extracellular solute-binding protein, family 5
sw_6_scaffold_3_95

Not on your lists

comp(85243..86865)
DNA (1623bp) protein (541aa)
gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltranspeptidase n=1 Tax=uncultured prokaryote 2E01B RepID=Q2LGP5_9ZZZZ
Gamma-glutamyltranspeptidase {ECO:0000313|EMBL:ABC70148.1}; TaxID=363283 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote 2E01B.;"
sw_6_scaffold_3_96
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(86941..87783)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQA0_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36293.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_6_scaffold_3_97
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

87834..88511
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IB81_9EURY
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:AHG02668.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium s
biotin/lipoate A/B protein ligase
sw_6_scaffold_3_98
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

88546..89811
DNA (1266bp) protein (422aa)
dihydroorotase (EC:3.5.2.3)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=485914 species="Archaea; Euryarchaeota; Halobact
Dihydroorotase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWY4_HALMD
sw_6_scaffold_3_99
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(89803..90339)
DNA (537bp) protein (179aa)
GNAT family acetyltransferase (EC:2.3.1.-)
GNAT family acetyltransferase {ECO:0000313|EMBL:CCQ36289.1}; EC=2.3.1.- {ECO:0000313|EMBL:CCQ36289.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N
GNAT family acetyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y1D3_NATM8
sw_6_scaffold_3_100
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(90336..90704)
DNA (369bp) protein (123aa)
UspA domain protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NMT5_9EURY
UspA domain protein {ECO:0000313|EMBL:EMA59096.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 21995.;"
stress response protein
sw_6_scaffold_3_101
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

90786..91139
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD05_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43616.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_6_scaffold_3_102

Not on your lists

91187..91807
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4Y0Q2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS04502.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
sw_6_scaffold_3_103
unknown

Not on your lists

comp(91804..92301)
DNA (498bp) protein (166aa)

This feature has no annotations

sw_6_scaffold_3_104
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

92436..94637
DNA (2202bp) protein (734aa)
xenobiotic-transporting ATPase id=24614118 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Xenobiotic-transporting ATPase {ECO:0000313|EMBL:ESP89416.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
ABC-type multidrug transport system, ATPase and permease component
sw_6_scaffold_3_105
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

94700..97204
DNA (2505bp) protein (835aa)
ATP-dependent RNA helicase/nuclease Hef {ECO:0000313|EMBL:CAI48259.1}; EC=3.6.4.13 {ECO:0000313|EMBL:CAI48259.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
ATP-dependent RNA helicase/nuclease Hef n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUC2_NATPD
Hef nuclease
sw_6_scaffold_3_106
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(97201..97779)
DNA (579bp) protein (193aa)
Sjogrens syndrome scleroderma autoantigen 1 protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PQ74_9EURY
hypothetical protein
Sjogrens syndrome scleroderma autoantigen 1 protein {ECO:0000313|EMBL:ERJ05046.1}; Uncharacterized protein {ECO:0000313|EMBL:CCQ33086.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; H
sw_6_scaffold_3_107
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(97818..98378)
DNA (561bp) protein (187aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=Q5UZ32_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV47471.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_6_scaffold_3_108
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(98379..100217)
DNA (1839bp) protein (613aa)
Glycyl-tRNA ligase {ECO:0000313|EMBL:ELZ58923.1}; EC=6.1.1.14 {ECO:0000313|EMBL:ELZ58923.1};; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;"
glyS; glycyl-tRNA synthetase (EC:6.1.1.14)
Glycyl-tRNA ligase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FHX2_9EURY
sw_6_scaffold_3_109
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(100214..101059)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1K8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29335.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
CBS domain containing protein
sw_6_scaffold_3_110
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(101112..101693)
DNA (582bp) protein (194aa)
Uncharacterized protein n=2 Tax=Halorubrum distributum RepID=M0EDP6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ45183.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 9100
hypothetical protein
sw_6_scaffold_3_111
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(101737..102171)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PFA2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ05732.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_6_scaffold_3_112
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(102164..103498)
DNA (1335bp) protein (445aa)
ABC-type oligopeptide transporter, ATP-binding protein OppF (TC 3.A.1.5.1) n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PFA3_9EURY
oppF; ABC-type oligopeptide transporter, ATP-binding protein OppF (TC 3.A.1.5.1)
ABC-type oligopeptide transporter, ATP-binding protein OppF (TC 3.A.1.5.1) {ECO:0000313|EMBL:CCQ33943.1}; Oligopeptide ABC transporter ATP-binding domain containing protein {ECO:0000313|EMBL:ERJ05733.
sw_6_scaffold_3_113
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(103491..104570)
DNA (1080bp) protein (360aa)
ABC-type oligopeptide transporter, ATP-binding protein OppD (TC 3.A.1.5.1) n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PFA4_9EURY
oppD; ABC-type oligopeptide transporter, ATP-binding protein OppD (TC 3.A.1.5.1)
ABC-type oligopeptide transporter, ATP-binding protein OppD (TC 3.A.1.5.1) {ECO:0000313|EMBL:CCQ33942.1}; Oligopeptide ABC transporter protein {ECO:0000313|EMBL:ERJ05734.1}; TaxID=1033806 species="Arc
sw_6_scaffold_3_114
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(104570..106120)
DNA (1551bp) protein (517aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1PQX4_9EURY
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:ERG96167.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; H
dppC; ABC-type dipeptide/oligopeptide/nickel transport system, permease components II
sw_6_scaffold_3_115
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(106122..107204)
DNA (1083bp) protein (361aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1N2L7_9EURY
dppB2; ABC-type transport system permease protein (probable substrate dipeptide/oligopeptide/nickel)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:ERG90750.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; H
sw_6_scaffold_3_116
unknown

Not on your lists

comp(107201..107290)
DNA (90bp) protein (30aa)

This feature has no annotations

sw_6_scaffold_3_117
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(107402..109249)
DNA (1848bp) protein (616aa)
dppA2; dipeptide/oligopeptide/nickel ABC transporter substrate-binding protein id=24633376 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
ABC-type oligopeptide transport system, periplasmic component {ECO:0000313|EMBL:ERG96164.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;
dppA; ABC-type dipeptide/oligopeptide/nickel transport systems, substrate-binding protein
sw_6_scaffold_3_118
unknown

Not on your lists

109556..109714
DNA (159bp) protein (53aa)

This feature has no annotations

Displaying items 91-120 of 151 in total

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