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sw_6_scaffold_3

Search features with annotation key words

Displaying items 121-150 of 151 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_3_119
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(109705..110016)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVT2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49862.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_6_scaffold_3_120
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(110067..110579)
DNA (513bp) protein (171aa)
KEOPS complex subunit Cgi121 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XU72_NATM8
cgi121; KEOPS complex subunit Cgi121
KEOPS complex subunit Cgi121 {ECO:0000313|EMBL:CCQ38042.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapen
sw_6_scaffold_3_121
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(110579..112867)
DNA (2289bp) protein (763aa)
ATP-dependent DNA helicase Hel308 {ECO:0000255|HAMAP-Rule:MF_00442}; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_00442};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
mer3_1; ski2-like helicase (EC:3.6.1.-)
Putative ski2-type helicase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=HELS_NATPD
sw_6_scaffold_3_122
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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112952..113203
DNA (252bp) protein (84aa)
Ferredoxin n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NF17_9EURY
Ferredoxin {ECO:0000313|EMBL:EMA55290.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
hypothetical protein
sw_6_scaffold_3_123
unknown

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113245..113334
DNA (90bp) protein (30aa)

This feature has no annotations

sw_6_scaffold_3_124
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(113372..114283)
DNA (912bp) protein (304aa)
mdhA; malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase (NAD) n=1 Tax=Halogranum salarium B-1 RepID=J3JGC0_9EURY
Malate dehydrogenase (NAD) {ECO:0000313|EMBL:EJN59966.2}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_6_scaffold_3_125
unknown

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114366..114683
DNA (318bp) protein (106aa)

This feature has no annotations

sw_6_scaffold_3_126
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(114696..115892)
DNA (1197bp) protein (399aa)
Amidohydrolase, imidazolonepropionase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VWJ9_9EURY
amidohydrolase, imidazolonepropionase
Amidohydrolase, imidazolonepropionase {ECO:0000313|EMBL:AGN00656.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp
sw_6_scaffold_3_127
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(115941..116918)
DNA (978bp) protein (326aa)
tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase {ECO:0000256|HAMAP-Rule:MF_01922}; EC=2.5.1.114 {ECO:0000256|HAMAP-Rule:MF_01922};; tRNA wyosine derivatives biosynthesis protein T
Trans-aconitate 2-methyltransferase protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJ49_9EURY
tRNA methylase Trm12p Wyeosine biosynthesis
sw_6_scaffold_3_128
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(116911..118032)
DNA (1122bp) protein (374aa)
NMD3 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISW5_NATPD
hypothetical protein
NMD3 family protein {ECO:0000313|EMBL:CAI48770.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_6_scaffold_3_129
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(118199..119929)
DNA (1731bp) protein (577aa)
Helicase domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITJ3_NATPD
helicase-like protein
Helicase domain protein {ECO:0000313|EMBL:CAI48540.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_6_scaffold_3_130
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(120035..120208)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CKF0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22842.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
sw_6_scaffold_3_131
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

120307..121302
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITU3_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48440.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_6_scaffold_3_132
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(121453..121740)
DNA (288bp) protein (96aa)
Uncharacterized protein n=2 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITT2_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48451.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_6_scaffold_3_133
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

121859..122662
DNA (804bp) protein (268aa)
PHP domain-containing protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W2X6_9EURY
PHP domain-containing protein
PHP domain-containing protein {ECO:0000313|EMBL:AGN00197.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht
sw_6_scaffold_3_134
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

122694..122855
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5G4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40643.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_6_scaffold_3_135
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(123060..125195)
DNA (2136bp) protein (712aa)
DNA ligase (EC:6.5.1.2)
DNA ligase {ECO:0000313|EMBL:AEH36228.1}; EC=6.5.1.2 {ECO:0000313|EMBL:AEH36228.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halop
DNA ligase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D3J4_HALXS
sw_6_scaffold_3_136
unknown

Not on your lists

comp(125312..125722)
DNA (411bp) protein (137aa)

This feature has no annotations

sw_6_scaffold_3_137
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(125764..126873)
DNA (1110bp) protein (370aa)
agt_2; aminotransferase class V (serine--pyruvate aminotransferase 2; alanine--glyoxylate aminotransferase 2) (EC:2.6.1.51 2.6.1.44); K00839 aminotransferase [EC:2.6.1.-] id=24619856 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
agt_2; aminotransferase class V (Serine--pyruvate aminotransferase 2; alanine--glyoxylate aminotransferase 2) (EC:2.6.1.51 2.6.1.44)
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase {ECO:0000313|EMBL:ERH07267.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonoti
sw_6_scaffold_3_138
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(127190..127552)
DNA (363bp) protein (121aa)
NifU C-terminal domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITG8_NATPD
Nitrogen fixation protein NifU {ECO:0000313|EMBL:KDS91246.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
NifU domain-containing protein
sw_6_scaffold_3_139
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(127619..127942)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BZ62_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ16240.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans D
hypothetical protein
sw_6_scaffold_3_140
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(128186..129604)
DNA (1419bp) protein (473aa)
Single-stranded-DNA-specific exonuclease RecJ1 {ECO:0000313|EMBL:CAI48192.1}; EC=3.1.-.- {ECO:0000313|EMBL:CAI48192.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
Single-stranded-DNA-specific exonuclease RecJ1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUI8_NATPD
recJ; single-stranded-DNA-specific exonuclease
sw_6_scaffold_3_trna_4
unknown

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comp(129747..129820)
DNA (74bp)
transferRNA
sw_6_scaffold_3_141
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(129865..130521)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT67_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48667.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_6_scaffold_3_142
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(130579..130746)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT68_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48666.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_6_scaffold_3_143
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

130984..131319
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PK32_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ07565.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_6_scaffold_3_144
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

131403..133187
DNA (1785bp) protein (595aa)
ferredoxin--nitrite reductase (EC:1.7.7.1)
Ferredoxin--nitrite reductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2K6_9EURY
Ferredoxin--nitrite reductase {ECO:0000313|EMBL:ELZ29756.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
sw_6_scaffold_3_145
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

133331..133609
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUE4_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48236.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_6_scaffold_3_146
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(133621..134853)
DNA (1233bp) protein (411aa)
Beta-lactamase domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXS7_HALMD
beta-lactamase
Beta-lactamase domain protein {ECO:0000313|EMBL:ACV46515.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoh
sw_6_scaffold_3_147

Not on your lists

comp(134930..135667)
DNA (738bp) protein (246aa)
probable oxidoreductase (short-chain dehydrogenase family) (EC:1.1.1.-)
Dehydrogenase n=1 Tax=uncultured archaeon A07HR60 RepID=V4YCR7_9ARCH
Dehydrogenase {ECO:0000313|EMBL:ESS12823.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
Displaying items 121-150 of 151 in total

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