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sw_6_scaffold_3

Search features with annotation key words

Displaying items 1-30 of 151 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_3_1
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(112..1494)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K279_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA15507.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
sw_6_scaffold_3_2
unknown

Not on your lists

comp(1506..1637)
DNA (132bp) protein (44aa)

This feature has no annotations

sw_6_scaffold_3_3
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2141..2524
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9Z0P9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY80060.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
sw_6_scaffold_3_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3070..4455)
DNA (1386bp) protein (462aa)
Signal recognition particle 54 kDa protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=SRP54_NATPD
srp54; signal recognition particle 54K protein
Signal recognition particle 54 kDa protein {ECO:0000255|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000255|HAMAP-Rule:MF_00306};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
sw_6_scaffold_3_5
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4542..4997
DNA (456bp) protein (152aa)
Ferritin n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PKC7_9EURY
Ferritin {ECO:0000313|EMBL:EMA69210.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
ferritin / Dps domain protein
sw_6_scaffold_3_6
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5046..7064
DNA (2019bp) protein (673aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTC9_HALBP
dipeptidyl aminopeptidase/acylaminoacyl peptidase
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:ADQ65874.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="H
sw_6_scaffold_3_7
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7076..7534)
DNA (459bp) protein (153aa)
Uncharacterized protein n=2 Tax=Archaea RepID=U1P2R0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH04491.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. J07HR59.;"
hypothetical protein
sw_6_scaffold_3_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7589..8644)
DNA (1056bp) protein (352aa)
Signal recognition particle receptor FtsY n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUJ8_NATPD
ftsY; signal recognition particle receptor SRalpha
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobact
sw_6_scaffold_3_9
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8648..9118)
DNA (471bp) protein (157aa)
prefoldin, subunit alpha; K04797 prefoldin alpha subunit id=24616519 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
pfdA; prefoldin alpha subunit
sw_6_scaffold_3_10
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(9115..9288)
DNA (174bp) protein (58aa)
50S ribosomal protein L18Ae n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=RL18A_HALUD
rplX; 50S ribosomal protein LX
50S ribosomal protein L18Ae {ECO:0000255|HAMAP-Rule:MF_00273}; 50S ribosomal protein L20e {ECO:0000255|HAMAP-Rule:MF_00273}; 50S ribosomal protein LX {ECO:0000255|HAMAP-Rule:MF_00273}; TaxID=519442 sp
sw_6_scaffold_3_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9337..9921)
DNA (585bp) protein (195aa)
translation initiation factor IF-6 n=1 Tax=Halomicrobium katesii RepID=UPI000382F134
translation initiation factor eIF-6
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
sw_6_scaffold_3_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9923..10198)
DNA (276bp) protein (92aa)
50S ribosomal protein L31e n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P2N3_HALMD
ribosomal protein L31e
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muko
sw_6_scaffold_3_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10195..10347)
DNA (153bp) protein (51aa)
50S ribosomal protein L39e n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M546_9EURY
rpl39e; 50S ribosomal protein L39e
50S ribosomal protein L39e {ECO:0000256|HAMAP-Rule:MF_00629}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharao
sw_6_scaffold_3_14
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10423..10941)
DNA (519bp) protein (173aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rul
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Halobacterium sp. DL1 RepID=G4IE07_9EURY
sw_6_scaffold_3_15
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10982..11587)
DNA (606bp) protein (202aa)
Uncharacterized protein n=2 Tax=Halobacterium salinarum RepID=B0R7L7_HALS3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP14736.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (
sw_6_scaffold_3_16
unknown

Not on your lists

comp(11629..11736)
DNA (108bp) protein (36aa)

This feature has no annotations

sw_6_scaffold_3_17
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11733..12662)
DNA (930bp) protein (310aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515, ECO:0000313|EMBL:ELZ40493.1}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515, ECO:0000313|EMBL:ELZ40493.1};; TaxID=1227484 species="Ar
delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E0G0_9EURY
sw_6_scaffold_3_18

Not on your lists

12743..13288
DNA (546bp) protein (182aa)
Putative membrane-associated protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XEN9_9ARCH
Putative membrane-associated protein {ECO:0000313|EMBL:ESS06514.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
sw_6_scaffold_3_19
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13392..13934)
DNA (543bp) protein (181aa)
UPF0290 protein C440_07702 n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IGG8_9EURY
UPF0290 protein C440_07702 {ECO:0000256|HAMAP-Rule:MF_01117}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA
hypothetical protein
sw_6_scaffold_3_20
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14029..14859
DNA (831bp) protein (277aa)
Proline dehydrogenase n=1 Tax=Halogranum salarium B-1 RepID=J3JE35_9EURY
Proline dehydrogenase {ECO:0000313|EMBL:EJN58021.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
Proline dehydrogenase
sw_6_scaffold_3_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14856..15467)
DNA (612bp) protein (204aa)
DUF502 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITF0_NATPD
hypothetical protein
DUF502 family protein {ECO:0000313|EMBL:CAI48584.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
sw_6_scaffold_3_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15552..16889
DNA (1338bp) protein (446aa)
hemL; glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000255|HAMAP-Rule:MF_00375}; Short=GSA {ECO:0000255|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000255|HAMAP-Rule:MF_00375};; Glutamate-1-semialdehyde aminot
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=GSA_NATPD
sw_6_scaffold_3_23
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16946..17203)
DNA (258bp) protein (86aa)
Glutaredoxin n=1 Tax=Halogranum salarium B-1 RepID=J3A2M6_9EURY
Glutaredoxin {ECO:0000313|EMBL:EJN59573.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
glutaredoxin
sw_6_scaffold_3_24
unknown

Not on your lists

comp(17632..18069)
DNA (438bp) protein (146aa)

This feature has no annotations

sw_6_scaffold_3_25
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18223..19272
DNA (1050bp) protein (350aa)
Porphobilinogen deaminase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LNJ6_9EURY
Porphobilinogen deaminase {ECO:0000313|EMBL:EMA34688.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
porphobilinogen deaminase
sw_6_scaffold_3_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19265..20020
DNA (756bp) protein (252aa)
cysG2; uroporphyrin-III C-methyltransferase (EC:2.1.1.107)
Uroporphyrin-III C-methyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1C2_9EURY
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:ELZ29240.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex ca
sw_6_scaffold_3_27
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20036..20770
DNA (735bp) protein (245aa)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:ELY55566.1}; EC=4.2.1.75 {ECO:0000313|EMBL:ELY55566.1};; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natro
Uroporphyrinogen-III synthase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X295_9EURY
uroporphyrinogen-III synthase
sw_6_scaffold_3_28

Not on your lists

20919..22157
DNA (1239bp) protein (413aa)
Extracellular ligand-binding receptor n=1 Tax=halophilic archaeon DL31 RepID=G2MHC6_9ARCH
extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AEN06521.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_6_scaffold_3_29
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22158..23048
DNA (891bp) protein (297aa)
Branched-chain amino acid ABC transporter permease protein I n=2 Tax=Haloarcula hispanica RepID=G0HV78_HALHT
branched-chain amino acid ABC transporter permease
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:AHB66342.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="
sw_6_scaffold_3_30
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23045..24094
DNA (1050bp) protein (350aa)
Inner-membrane translocator n=1 Tax=Halobacterium sp. DL1 RepID=G4IDI6_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:AHG04921.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source
branched-chain amino acid ABC transporter permease
Displaying items 1-30 of 151 in total

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