Alias: ACD24_7808.7081.18
name | lists | location/seqs | annotations | notes |
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ACD24_28_1
uncultured bacterium, Bacteria
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Not on your lists |
comp(2..427)
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hypothetical protein
RNASE_3_1 (db=PatternScan db_id=PS00517 from=44 to=52 evalue=0.0 interpro_id=IPR000999 interpro_description=Ribonuclease III GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: ribonuclease III activity (GO:0004525), Biological Process: RNA processing (GO:0006396))
RIBONUCLEASE III (db=HMMPanther db_id=PTHR11207 from=6 to=142 evalue=2.9e-46)
no description (db=HMMSmart db_id=SM00535 from=20 to=140 evalue=6.2e-40 interpro_id=IPR000999 interpro_description=Ribonuclease III GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: ribonuclease III activity (GO:0004525), Biological Process: RNA processing (GO:0006396))
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ACD24_28_2
RBG_16_WWE3_37_10_curated, WWE3, Bacteria
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Not on your lists |
comp(439..672)
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seg (db=Seg db_id=seg from=33 to=55)
ACP-like (db=superfamily db_id=SSF47336 from=1 to=76 evalue=1.2e-10 interpro_id=IPR009081 interpro_description=Acyl carrier protein-like GO=Molecular Function: acyl carrier activity (GO:0000036))
no description (db=Gene3D db_id=G3DSA:1.10.1200.10 from=1 to=77 evalue=4.1e-09)
PP-binding (db=HMMPfam db_id=PF00550 from=7 to=72 evalue=7.5e-06 interpro_id=IPR006163 interpro_description=Phosphopantetheine-binding GO=Molecular Function: cofactor binding (GO:0048037))
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ACD24_28_3
RBG_16_WWE3_37_10_curated, WWE3, Bacteria
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Not on your lists |
comp(676..1125)
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hypothetical protein
nusB: transcription antitermination factor N (db=HMMTigr db_id=TIGR01951 from=7 to=139 evalue=3.0e-42 interpro_id=IPR011605 interpro_description=NusB antitermination factor GO=Molecular Function: transcription termination factor activity (GO:0003715), Biological Process: transcription termination (GO:0006353))
NusB (db=HMMPfam db_id=PF01029 from=11 to=136 evalue=5.6e-33 interpro_id=IPR006027 interpro_description=NusB/RsmB/TIM44 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
NusB-like (db=superfamily db_id=SSF48013 from=7 to=136 evalue=8.9e-33 interpro_id=IPR006027 interpro_description=NusB/RsmB/TIM44 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
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ACD24_28_4
RBG_16_WWE3_37_10_curated, WWE3, Bacteria
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Not on your lists |
comp(1174..1320)
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Ribosomal_L32p (db=HMMPfam db_id=PF01783 from=2 to=42 evalue=8.7e-10 interpro_id=IPR002677 interpro_description=Ribosomal protein L32p GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
rpmF_bact: ribosomal protein L32 (db=HMMTigr db_id=TIGR01031 from=2 to=41 evalue=4.7e-07 interpro_id=IPR002677 interpro_description=Ribosomal protein L32p GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
Zn-binding ribosomal proteins (db=superfamily db_id=SSF57829 from=2 to=42 evalue=5.5e-07 interpro_id=IPR011332 interpro_description=Ribosomal protein, zinc-binding domain GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L32 (db=HAMAP db_id=MF_00340 from=1 to=47 evalue=9.147 interpro_id=IPR002677 interpro_description=Ribosomal protein L32p GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
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ACD24_28_5
uncultured bacterium, Bacteria
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Not on your lists |
1419..2069
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molybdopterin binding oxidoreductase
Oxidoreductase molybdopterin-binding domain (db=superfamily db_id=SSF56524 from=6 to=216 evalue=2.9e-53 interpro_id=IPR000572 interpro_description=Oxidoreductase, molybdopterin-binding domain GO=Molecular Function: electron carrier activity (GO:0009055))
no description (db=Gene3D db_id=G3DSA:3.90.420.10 from=46 to=215 evalue=1.8e-47 interpro_id=IPR000572 interpro_description=Oxidoreductase, molybdopterin-binding domain GO=Molecular Function: electron carrier activity (GO:0009055))
Oxidored_molyb (db=HMMPfam db_id=PF00174 from=60 to=199 evalue=1.3e-37 interpro_id=IPR000572 interpro_description=Oxidoreductase, molybdopterin-binding domain GO=Molecular Function: electron carrier activity (GO:0009055))
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ACD24_28_6
RBG_16_WWE3_37_10_curated, WWE3, Bacteria
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Not on your lists |
comp(2072..2677)
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RNA methyltransferase, RsmD family
seg (db=Seg db_id=seg from=171 to=184)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=4 to=201 evalue=1.1e-33)
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ACD24_28_7
RBG_16_WWE3_37_10_curated, WWE3, Bacteria
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Not on your lists |
comp(2726..4750)
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hypothetical protein
hypothetical protein
ATP-dependent DNA helicase RecG n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCP1_THET1 (db=UNIREF evalue=1.0e-130 bit_score=471.0 identity=38.67 coverage=99.4074074074074)
seg (db=Seg db_id=seg from=174 to=190)
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ACD24_28_8
RBG_16_WWE3_37_10_curated, WWE3, Bacteria
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Not on your lists |
comp(4782..5135)
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Putative uncharacterized protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J1P1_9BACL (db=UNIREF evalue=2.0e-22 bit_score=107.0 identity=49.11 coverage=92.3728813559322)
hypothetical protein
DUF86 (db=HMMPfam db_id=PF01934 from=14 to=112 evalue=6.4e-27 interpro_id=IPR008201 interpro_description=Protein of unknown function DUF86)
hypothetical protein Tax=RBG_16_WWE3_37_10_curated
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ACD24_28_9
RBG_16_WWE3_37_10_curated, WWE3, Bacteria
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Not on your lists |
comp(5122..5418)
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DNA polymerase subunit beta
Nucleotidyltransferase (db=superfamily db_id=SSF81301 from=3 to=94 evalue=4.9e-18)
NTP_transf_2 (db=HMMPfam db_id=PF01909 from=10 to=91 evalue=2.1e-12 interpro_id=IPR002934 interpro_description=Nucleotidyl transferase domain GO=Molecular Function: nucleotidyltransferase activity (GO:0016779))
DNA polymerase subunit beta; K07075 Tax=RBG_16_WWE3_37_10_curated
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ACD24_28_10
RBG_16_WWE3_37_10_curated, WWE3, Bacteria
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Not on your lists |
comp(5516..6208)
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5516..6208 - (rbs_motif=TAA rbs_spacer=3bp)
hypothetical protein Tax=RBG_16_WWE3_37_10_curated
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ACD24_28_11
uncultured bacterium, Bacteria
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Not on your lists |
comp(6311..6589)
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coiled-coil (db=Coil db_id=coil from=32 to=60 evalue=NA)
seg (db=Seg db_id=seg from=32 to=54)
transmembrane_regions (db=TMHMM db_id=tmhmm from=69 to=91)
Uncharacterized protein {ECO:0000313|EMBL:EKD95437.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD24_28_12
RBG_16_WWE3_37_10_curated, WWE3, Bacteria
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Not on your lists |
comp(6591..7121)
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hypothetical protein
seg (db=Seg db_id=seg from=84 to=95)
no description (db=Gene3D db_id=G3DSA:1.10.240.10 from=7 to=120 evalue=2.3e-22)
TYROSYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR11766 from=1 to=176 evalue=1.6e-20 interpro_id=IPR002307 interpro_description=Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: tyrosine-tRNA ligase activity (GO:0004831), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tyrosyl-tRNA aminoacylation (GO:0006437))
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