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ACD24_142

Alias: ACD24_406201.2841.6

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD24_142_1

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comp(395..994)
DNA (600bp) protein (200aa)
RDD protein
seg (db=Seg db_id=seg from=158 to=173)
seg (db=Seg db_id=seg from=49 to=70)
transmembrane_regions (db=TMHMM db_id=tmhmm from=151 to=173)
ACD24_142_2
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

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comp(981..1583)
DNA (603bp) protein (201aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=136 to=158)
transmembrane_regions (db=TMHMM db_id=tmhmm from=97 to=126)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=58)
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=21)
ACD24_142_3
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

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comp(1610..2284)
DNA (675bp) protein (225aa)
seg (db=Seg db_id=seg from=209 to=223)
transmembrane_regions (db=TMHMM db_id=tmhmm from=189 to=208)
transmembrane_regions (db=TMHMM db_id=tmhmm from=127 to=149)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=38)
ACD24_142_4
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

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2369..2689
DNA (321bp) protein (107aa)
hypothetical protein
seg (db=Seg db_id=seg from=97 to=106)
HISTIDYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR11476 from=3 to=95 evalue=4.0e-16 interpro_id=IPR004516 interpro_description=Histidyl-tRNA synthetase, class IIa GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: histidine-tRNA ligase activity (GO:0004821), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: histidyl-tRNA aminoacylation (GO:0006427))
Class II aaRS and biotin synthetases (db=superfamily db_id=SSF55681 from=8 to=96 evalue=5.3e-16)
ACD24_142_5
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

2727..2873
DNA (147bp) protein (49aa)
Suspect SCG annotation. See neighboring gene [ACD24_142_4].
hypothetical protein
HISTIDYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR11476 from=1 to=49 evalue=1.6e-10 interpro_id=IPR004516 interpro_description=Histidyl-tRNA synthetase, class IIa GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: histidine-tRNA ligase activity (GO:0004821), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: histidyl-tRNA aminoacylation (GO:0006427))
Class II aaRS and biotin synthetases (db=superfamily db_id=SSF55681 from=1 to=49 evalue=1.3e-09)
Displaying 5 items

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