ggKbase home page

ACD24_265

Alias: ACD24_8465.3763.16

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD24_265_1

Not on your lists

comp(121..252)
DNA (132bp) protein (44aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
Uncharacterized protein {ECO:0000313|EMBL:EKD95361.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD24_265_2

Not on your lists

comp(319..1824)
DNA (1506bp) protein (502aa)
P4 family phage/plasmid primase
P4 family phage/plasmid primase
Phage/plasmid primase, P4 family n=1 Tax=Geobacillus thermoglucosidasius C56-YS93 RepID=D4YD21_BACTR (db=UNIREF evalue=9.0e-103 bit_score=377.0 identity=44.84 coverage=87.4501992031873)
seg (db=Seg db_id=seg from=369 to=385)
ACD24_265_3

Not on your lists

comp(1797..2402)
DNA (606bp) protein (202aa)
DNA primase, catalytic core (EC:2.7.7.-)
seg (db=Seg db_id=seg from=180 to=191)
Zinc beta-ribbon (db=superfamily db_id=SSF57783 from=2 to=100 evalue=5.0e-17)
zf-CHC2 (db=HMMPfam db_id=PF01807 from=4 to=95 evalue=9.8e-13 interpro_id=IPR002694 interpro_description=Zinc finger, CHC2-type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA primase activity (GO:0003896), Biological Process: DNA replication (GO:0006260), Molecular Function: zinc ion binding (GO:0008270))
ACD24_265_4

Not on your lists

comp(2533..2775)
DNA (243bp) protein (81aa)
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=78 evalue=4.6e-14 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
HTH_3 (db=HMMPfam db_id=PF01381 from=11 to=65 evalue=2.0e-12 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
no description (db=HMMSmart db_id=SM00530 from=10 to=65 evalue=1.0e-11 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=8 to=67 evalue=2.3e-11)
ACD24_265_5

Not on your lists

2936..3571
DNA (636bp) protein (212aa)
XRE family transcriptional regulator
Transcriptional regulator n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XUY0_9LACO (db=UNIREF evalue=5.0e-11 bit_score=71.2 identity=43.48 coverage=32.0754716981132)
coiled-coil (db=Coil db_id=coil from=5 to=26 evalue=NA)
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=8 to=77 evalue=3.9e-16)
Displaying 5 items

View Taxonomy