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ACD24_270

Alias: ACD24_306722.3109.6

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD24_270_1

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comp(3..338)
DNA (336bp) protein (112aa)
hypothetical protein
GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT A (db=HMMPanther db_id=PTHR11895:SF7 from=17 to=111 evalue=9.6e-26)
AMIDASE (db=HMMPanther db_id=PTHR11895 from=17 to=111 evalue=9.6e-26 interpro_id=IPR000120 interpro_description=Amidase GO=Molecular Function: carbon-nitrogen ligase activity, with glutamine as amido-N-donor (GO:0016884))
Amidase signature (AS) enzymes (db=superfamily db_id=SSF75304 from=1 to=112 evalue=1.0e-22 interpro_id=IPR000120 interpro_description=Amidase GO=Molecular Function: carbon-nitrogen ligase activity, with glutamine as amido-N-donor (GO:0016884))
ACD24_270_2
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

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comp(331..630)
DNA (300bp) protein (100aa)
gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit (EC:6.3.5.-)
Glu-tRNAGln amidotransferase C subunit (db=superfamily db_id=SSF141000 from=5 to=95 evalue=3.1e-15)
gatC: glutamyl-tRNA(Gln) and/or aspartyl-tRN (db=HMMTigr db_id=TIGR00135 from=6 to=97 evalue=3.1e-12 interpro_id=IPR003837 interpro_description=Glu-tRNAGln amidotransferase, C subunit GO=Biological Process: regulation of translational fidelity (GO:0006450))
Glu-tRNAGln (db=HMMPfam db_id=PF02686 from=25 to=85 evalue=4.4e-10 interpro_id=IPR003837 interpro_description=Glu-tRNAGln amidotransferase, C subunit GO=Biological Process: regulation of translational fidelity (GO:0006450))
ACD24_270_3

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comp(764..2050)
DNA (1287bp) protein (429aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=189 to=208)
transmembrane_regions (db=TMHMM db_id=tmhmm from=67 to=86)
transmembrane_regions (db=TMHMM db_id=tmhmm from=127 to=149)
ACD24_270_4

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comp(2351..2818)
DNA (468bp) protein (156aa)
hypothetical protein
NUDIX hydrolase n=1 Tax=Frankia sp. CcI3 RepID=Q2JEK8_FRASC (db=UNIREF evalue=9.0e-25 bit_score=115.0 identity=41.5 coverage=89.7435897435898)
NUDIX_BOX (db=PatternScan db_id=PS00893 from=42 to=63 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
Nudix (db=superfamily db_id=SSF55811 from=2 to=138 evalue=5.0e-22 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
ACD24_270_5
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

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comp(2826..3143)
DNA (318bp) protein (106aa)
hypothetical protein
LemA (db=HMMPfam db_id=PF04011 from=5 to=105 evalue=3.7e-30 interpro_id=IPR007156 interpro_description=LemA)
LemA-like (db=superfamily db_id=SSF140478 from=1 to=95 evalue=8.0e-28)
LemA family protein; K03744 LemA protein alias=ACD24_306722.3109.6G0005,ACD24_306722.3109.6_5,ACD24_C00270G00005 id=29000 tax=ACD24 species=Methanobrevibacter ruminantium genus=Methanobrevibacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota organism_group=WWE3 organism_desc=WWE3
Displaying 5 items

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