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ACD15_11

Alias: ACD15_94023.11720.15

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD15_11_1

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115..1563
DNA (1449bp) protein (483aa)
lysyl-tRNA synthetase
lysyl-tRNA synthetase
Lysyl-tRNA synthetase n=2 Tax=Desulfitobacterium hafniense RepID=B8FZE8_DESHD (db=UNIREF evalue=5.0e-111 bit_score=405.0 identity=42.83 coverage=98.9648033126294)
seg (db=Seg db_id=seg from=287 to=297)
ACD15_11_2

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1574..2155
DNA (582bp) protein (194aa)
hypothetical protein
Adenylate cyclase n=1 Tax=Frankia sp. EUN1f RepID=D3CXW7_9ACTO (db=UNIREF evalue=7.0e-24 bit_score=113.0 identity=40.61 coverage=83.5051546391753)
CYTH-like phosphatases (db=superfamily db_id=SSF55154 from=3 to=164 evalue=2.5e-16 interpro_id=IPR004206 interpro_description=mRNA capping enzyme, beta subunit GO=Molecular Function: polynucleotide 5'-phosphatase activity (GO:0004651), Molecular Function: protein binding (GO:0005515), Biological Process: mRNA capping (GO:0006370), Cellular Component: mRNA cap methyltransferase complex (GO:0031533))
CYTH (db=HMMPfam db_id=PF01928 from=49 to=148 evalue=1.3e-08 interpro_id=IPR008172 interpro_description=Adenylate cyclase GO=Molecular Function: adenylate cyclase activity (GO:0004016), Biological Process: cAMP biosynthetic process (GO:0006171))
ACD15_11_3

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2160..2744
DNA (585bp) protein (195aa)
hypothetical protein
seg (db=Seg db_id=seg from=147 to=155)
HDIG: uncharacterized domain HDIG (db=HMMTigr db_id=TIGR00277 from=19 to=96 evalue=1.4e-06 interpro_id=IPR006675 interpro_description=Uncharacterised protein family HDIG)
HD (db=HMMPfam db_id=PF01966 from=26 to=104 evalue=8.1e-05 interpro_id=IPR006674 interpro_description=Metal-dependent phosphohydrolase, HD subdomain)
ACD15_11_4

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2773..3309
DNA (537bp) protein (179aa)
hypothetical protein
DUF88 (db=HMMPfam db_id=PF01936 from=16 to=136 evalue=7.6e-15)
Uncharacterized protein {ECO:0000313|EMBL:EKE10656.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein alias=ACD15_C00011G00004,ACD15_94023.11720.15G0004,ACD15_94023.11720.15_4 id=8160 tax=ACD15 species=Paracoccus denitrificans genus=Paracoccus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i
ACD15_11_5

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3441..4070
DNA (630bp) protein (210aa)
peptidase S51 dipeptidase E
seg (db=Seg db_id=seg from=65 to=76)
Peptidase_S51 (db=HMMPfam db_id=PF03575 from=46 to=201 evalue=9.6e-29 interpro_id=IPR005320 interpro_description=Peptidase S51, dipeptidase E GO=Biological Process: proteolysis (GO:0006508), Molecular Function: serine-type peptidase activity (GO:0008236))
no description (db=Gene3D db_id=G3DSA:3.40.50.880 from=2 to=204 evalue=3.5e-24)
ACD15_11_6

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4106..4711
DNA (606bp) protein (202aa)
seg (db=Seg db_id=seg from=64 to=77)
Thioredoxin-like (db=superfamily db_id=SSF52833 from=101 to=201 evalue=4.8e-14 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
4Fe-4S ferredoxins (db=superfamily db_id=SSF54862 from=2 to=149 evalue=9.1e-12)
no description (db=Gene3D db_id=G3DSA:3.40.30.10 from=103 to=196 evalue=1.5e-06 interpro_id=IPR012335 interpro_description=Thioredoxin fold)
ACD15_11_7

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4716..5087
DNA (372bp) protein (124aa)
4716..5087 + (rbs_motif=AATAA rbs_spacer=4bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE10659.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_11_8

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5103..5765
DNA (663bp) protein (221aa)
metal dependent phosphohydrolase
seg (db=Seg db_id=seg from=3 to=16)
seg (db=Seg db_id=seg from=192 to=203)
seg (db=Seg db_id=seg from=61 to=71)
ACD15_11_9

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5839..6267
DNA (429bp) protein (143aa)
5839..6267 + (rbs_motif=AATAA rbs_spacer=10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE10661.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Maf-like protein
ACD15_11_10

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6282..6749
DNA (468bp) protein (156aa)
hypothetical protein
NUDIX_BOX (db=PatternScan db_id=PS00893 from=37 to=58 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
Nudix (db=superfamily db_id=SSF55811 from=6 to=122 evalue=1.3e-21 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
NUDIX (db=HMMPfam db_id=PF00293 from=7 to=124 evalue=3.1e-17 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
ACD15_11_11

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6755..7177
DNA (423bp) protein (141aa)
coiled-coil (db=Coil db_id=coil from=40 to=61 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE10663.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Maf-like protein
ACD15_11_12

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7195..7740
DNA (546bp) protein (182aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=119 to=141)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
transmembrane_regions (db=TMHMM db_id=tmhmm from=156 to=178)
ACD15_11_13

Not on your lists

7785..9056
DNA (1272bp) protein (424aa)
seryl-tRNA synthetase
seryl-tRNA synthetase
Seryl-tRNA synthetase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PQB0_9SPIO (db=UNIREF evalue=9.0e-120 bit_score=434.0 identity=53.13 coverage=99.5283018867924)
coiled-coil (db=Coil db_id=coil from=30 to=58 evalue=NA)
ACD15_11_14

Not on your lists

9156..9716
DNA (561bp) protein (187aa)
9156..9716 + (rbs_motif=AATAA rbs_spacer=5bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE10666.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_11_15

Not on your lists

9728..10354
DNA (627bp) protein (209aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=187 to=198)
seg (db=Seg db_id=seg from=33 to=48)
seg (db=Seg db_id=seg from=5 to=22)
ACD15_11_16

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10578..10766
DNA (189bp) protein (63aa)
seg (db=Seg db_id=seg from=8 to=17)
Uncharacterized protein {ECO:0000313|EMBL:EKE10652.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 16 items

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