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ACD15_56

Alias: ACD15_8672.10480.16

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD15_56_1

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264..914
DNA (651bp) protein (217aa)
hypothetical protein (db=KEGG evalue=1.0e-18 bit_score=96.3 identity=35.33 coverage=67.741935483871)
hypothetical protein alias=ACD15_8672.10480.16G0001,ACD15_8672.10480.16_1,ACD15_C00056G00001 id=9063 tax=ACD15 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE10712.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_56_2

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1752..2783
DNA (1032bp) protein (344aa)
RNA-directed DNA polymerase
RVT_1 (db=HMMPfam db_id=PF00078 from=74 to=276 evalue=1.2e-34 interpro_id=IPR000477 interpro_description=RNA-directed DNA polymerase (reverse transcriptase) GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: RNA-directed DNA polymerase activity (GO:0003964), Biological Process: RNA-dependent DNA replication (GO:0006278))
DNA/RNA polymerases (db=superfamily db_id=SSF56672 from=27 to=327 evalue=6.2e-27)
RT_POL (db=ProfileScan db_id=PS50878 from=57 to=278 evalue=17.711 interpro_id=IPR000477 interpro_description=RNA-directed DNA polymerase (reverse transcriptase) GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: RNA-directed DNA polymerase activity (GO:0003964), Biological Process: RNA-dependent DNA replication (GO:0006278))
ACD15_56_3

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comp(2810..3274)
DNA (465bp) protein (155aa)
Homing endonucleases (db=superfamily db_id=SSF55608 from=62 to=154 evalue=8.9e-07)
INTEIN_ENDONUCLEASE (db=ProfileScan db_id=PS50819 from=45 to=118 evalue=12.319 interpro_id=IPR004042 interpro_description=Intein DOD homing endonuclease GO=Molecular Function: endonuclease activity (GO:0004519))
Uncharacterized protein {ECO:0000313|EMBL:EKE10714.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_56_4

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3506..4300
DNA (795bp) protein (265aa)
cobyrinic acid ac-diamide synthase
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=254 evalue=5.5e-64)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=1 to=249 evalue=7.4e-56)
CbiA (db=HMMPfam db_id=PF01656 from=5 to=221 evalue=8.3e-45 interpro_id=IPR002586 interpro_description=Cobyrinic acid a,c-diamide synthase)
ACD15_56_5

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4435..5364
DNA (930bp) protein (310aa)
parB-like partition protein
parB_part: ParB-like partition proteins (db=HMMTigr db_id=TIGR00180 from=53 to=233 evalue=6.9e-55 interpro_id=IPR004437 interpro_description=ParB-like partition protein GO=Molecular Function: DNA binding (GO:0003677))
ParB/Sulfiredoxin (db=superfamily db_id=SSF110849 from=55 to=204 evalue=3.1e-36 interpro_id=IPR003115 interpro_description=ParB-like nuclease GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00470 from=58 to=147 evalue=8.9e-36 interpro_id=IPR003115 interpro_description=ParB-like nuclease GO=Molecular Function: DNA binding (GO:0003677))
ACD15_56_6

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comp(5430..6926)
DNA (1497bp) protein (499aa)
GTP pyrophosphokinase
GTP pyrophosphokinase
(P)ppGpp synthetase I, SpoT/RelA n=1 Tax=Bacillus coagulans 36D1 RepID=C1PAM4_BACCO (db=UNIREF evalue=6.0e-134 bit_score=481.0 identity=48.48 coverage=96.5931863727455)
seg (db=Seg db_id=seg from=349 to=364)
ACD15_56_7

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comp(7042..9273)
DNA (2232bp) protein (744aa)
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Geobacter lovleyi SZ RepID=B3EAT9_GEOLS (db=UNIREF evalue=0.0 bit_score=759.0 identity=51.58 coverage=95.8333333333333)
seg (db=Seg db_id=seg from=561 to=573)
ACD15_56_8

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comp(9307..10401)
DNA (1095bp) protein (365aa)
Rossmann fold DNA uptake nucleotide-binding protein
dprA: DNA protecting protein DprA (db=HMMTigr db_id=TIGR00732 from=71 to=290 evalue=1.1e-97 interpro_id=IPR003488 interpro_description=DNA recombination-mediator protein A GO=Biological Process: DNA mediated transformation (GO:0009294))
DNA_processg_A (db=HMMPfam db_id=PF02481 from=74 to=282 evalue=2.9e-75 interpro_id=IPR003488 interpro_description=DNA recombination-mediator protein A GO=Biological Process: DNA mediated transformation (GO:0009294))
MoCo carrier protein-like (db=superfamily db_id=SSF102405 from=82 to=290 evalue=1.7e-41)
Displaying 8 items

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