ggKbase home page

ACD7_1

Alias: ACD7_1857.13538.79

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD7_1_1

Not on your lists


comp(126..530)
DNA (405bp) protein (135aa)
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 n=1 Tax=beta proteobacterium KB13 RepID=B6BV86_9PROT (db=UNIREF evalue=3.0e-18 bit_score=94.0 identity=63.74 coverage=63.7037037037037)
seg (db=Seg db_id=seg from=109 to=130)
seg (db=Seg db_id=seg from=3 to=17)
ACD7_1_2

Not on your lists


comp(645..1163)
DNA (519bp) protein (173aa)
50S ribosomal protein L10
coiled-coil (db=Coil db_id=coil from=37 to=58 evalue=NA)
seg (db=Seg db_id=seg from=105 to=116)
Ribosomal_L10 (db=HMMPfam db_id=PF00466 from=3 to=100 evalue=7.4e-19 interpro_id=IPR001790 interpro_description=Ribosomal protein L10 GO=Cellular Component: intracellular (GO:0005622), Biological Process: ribosome biogenesis (GO:0042254))
ACD7_1_3

Not on your lists


comp(1387..1734)
DNA (348bp) protein (116aa)
30S ribosomal protein S16
seg (db=Seg db_id=seg from=78 to=101)
MITOCHONDRIAL RIBOSOMAL PROTEIN S16 (db=HMMPanther db_id=PTHR12919:SF5 from=1 to=107 evalue=2.3e-23)
30S RIBOSOMAL PROTEIN S16 (db=HMMPanther db_id=PTHR12919 from=1 to=107 evalue=2.3e-23 interpro_id=IPR000307 interpro_description=Ribosomal protein S16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD7_1_4

Not on your lists

comp(1972..2520)
DNA (549bp) protein (183aa)
LigT-like (db=superfamily db_id=SSF55144 from=3 to=180 evalue=5.7e-13 interpro_id=IPR009097 interpro_description=RNA ligase/cyclic nucleotide phosphodiesterase GO=Molecular Function: catalytic activity (GO:0003824), Cellular Component: intracellular (GO:0005622), Biological Process: RNA metabolic process (GO:0016070))
no description (db=Gene3D db_id=G3DSA:3.90.1140.10 from=3 to=180 evalue=1.3e-11)
Uncharacterized protein {ECO:0000313|EMBL:EKE21753.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD7_1_5

Not on your lists

comp(2731..2913)
DNA (183bp) protein (61aa)
2731..2913 - (rbs_motif=AATAA rbs_spacer=13bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE21754.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD7_1_6

Not on your lists

3298..5373
DNA (2076bp) protein (692aa)
primosomal protein N'
primosomal protein N'
Primosome assembly protein PriA n=1 Tax=Bacillus sp. SG-1 RepID=A6CPT3_9BACI (db=UNIREF evalue=3.0e-88 bit_score=330.0 identity=35.3 coverage=82.514450867052)
seg (db=Seg db_id=seg from=623 to=635)
ACD7_1_7

Not on your lists

comp(5833..6306)
DNA (474bp) protein (158aa)
5833..6306 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE21756.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD7_1_8

Not on your lists

comp(6914..7213)
DNA (300bp) protein (100aa)
6914..7213 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE21757.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD7_1_9

Not on your lists

7356..8498
DNA (1143bp) protein (381aa)
Glycosyl transferase group 1
seg (db=Seg db_id=seg from=243 to=254)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=9 to=380 evalue=1.3e-35)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=135 to=380 evalue=1.5e-19)
ACD7_1_10

Not on your lists

comp(8639..8962)
DNA (324bp) protein (108aa)
seg (db=Seg db_id=seg from=4 to=16)
Uncharacterized protein {ECO:0000313|EMBL:EKE21759.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD7_1_11

Not on your lists

9087..10580
DNA (1494bp) protein (498aa)
hypothetical protein
UPF0027 (db=HMMPfam db_id=PF01139 from=21 to=496 evalue=1.9e-62 interpro_id=IPR001233 interpro_description=Uncharacterised protein family UPF0027)
Hypothetical protein PH1602 (db=superfamily db_id=SSF103365 from=1 to=497 evalue=1.1e-56 interpro_id=IPR001233 interpro_description=Uncharacterised protein family UPF0027)
UNCHARACTERIZED (db=HMMPanther db_id=PTHR11118 from=36 to=497 evalue=2.0e-43 interpro_id=IPR001233 interpro_description=Uncharacterised protein family UPF0027)
ACD7_1_12

Not on your lists

10585..11223
DNA (639bp) protein (213aa)
thymidylate kinase (EC:2.7.4.9) (db=KEGG evalue=8.0e-09 bit_score=63.5 identity=25.81 coverage=84.9765258215963)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=211 evalue=9.9e-23)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=2 to=212 evalue=1.3e-14)
Thymidylate_kin (db=HMMPfam db_id=PF02223 from=6 to=47 evalue=2.1e-06 interpro_id=IPR000062 interpro_description=Thymidylate kinase-like GO=Molecular Function: ATP binding (GO:0005524))
ACD7_1_13

Not on your lists

11457..12941
DNA (1485bp) protein (495aa)
membrane protein involved in the export of O-antigen and teichoic acid
transmembrane_regions (db=TMHMM db_id=tmhmm from=373 to=395)
transmembrane_regions (db=TMHMM db_id=tmhmm from=399 to=421)
transmembrane_regions (db=TMHMM db_id=tmhmm from=434 to=453)
ACD7_1_14

Not on your lists

comp(13369..13518)
DNA (150bp) protein (50aa)
13369..13518 - (rbs_motif=TAAA rbs_spacer=8bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE21749.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 14 items

View Taxonomy