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ACD7_38

Alias: ACD7_506.18404.77

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD7_38_1
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

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comp(2..349)
DNA (348bp) protein (116aa)
endonuclease
Restriction endonuclease-like (db=superfamily db_id=SSF52980 from=13 to=115 evalue=1.3e-18 interpro_id=IPR011335 interpro_description=Restriction endonuclease, type II-like GO=Molecular Function: DNA binding (GO:0003677))
UPF0102 (db=HMMPfam db_id=PF02021 from=15 to=111 evalue=1.3e-17 interpro_id=IPR003509 interpro_description=Uncharacterised protein family UPF0102)
UPF0102 (db=HAMAP db_id=MF_00048 from=8 to=116 evalue=16.296 interpro_id=IPR003509 interpro_description=Uncharacterised protein family UPF0102)
ACD7_38_2

Not on your lists

comp(607..1683)
DNA (1077bp) protein (359aa)
dnaJ; chaperone protein DnaJ
seg (db=Seg db_id=seg from=63 to=96)
seg (db=Seg db_id=seg from=267 to=278)
DNAJ_1 (db=PatternScan db_id=PS00636 from=42 to=61 evalue=0.0 interpro_id=IPR018253 interpro_description=Heat shock protein DnaJ, conserved site GO=Molecular Function: heat shock protein binding (GO:0031072))
ACD7_38_3

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comp(1796..2422)
DNA (627bp) protein (209aa)
L-isoaspartyl protein carboxyl methyltransferase (EC:2.1.1.77)
seg (db=Seg db_id=seg from=113 to=126)
PCMT (db=HMMPfam db_id=PF01135 from=2 to=205 evalue=2.9e-58 interpro_id=IPR000682 interpro_description=Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO=Molecular Function: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity (GO:0004719), Biological Process: protein modification process (GO:0006464))
PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE (db=HMMPanther db_id=PTHR11579 from=2 to=203 evalue=6.0e-51 interpro_id=IPR000682 interpro_description=Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO=Molecular Function: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity (GO:0004719), Biological Process: protein modification process (GO:0006464))
ACD7_38_4
GWE2_OD1_35_164, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2453..2896)
DNA (444bp) protein (148aa)
hypothetical protein
Uncharacterised conserved protein, UCP004681 type (db=HMMPIR db_id=PIRSF004681 from=1 to=147 evalue=2.4e-41 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
YjbQ-like (db=superfamily db_id=SSF111038 from=1 to=147 evalue=1.6e-38 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
no description (db=Gene3D db_id=G3DSA:2.60.120.460 from=1 to=147 evalue=9.8e-35 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
ACD7_38_5
GWE2_OD1_35_164, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2984..4078)
DNA (1095bp) protein (365aa)
galactose-1-phosphate uridylyltransferase
seg (db=Seg db_id=seg from=3 to=17)
Galactose-1-phosphate uridylyltransferase (db=HMMPIR db_id=PIRSF000808 from=1 to=364 evalue=2.1e-79 interpro_id=IPR001937 interpro_description=Galactose-1-phosphate uridyl transferase, class I GO=Biological Process: galactose metabolic process (GO:0006012), Molecular Function: UDP-glucose:hexose-1-phosphate uridylyltransferase activity (GO:0008108), Molecular Function: zinc ion binding (GO:0008270))
GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE (db=HMMPanther db_id=PTHR11943 from=28 to=359 evalue=1.3e-60 interpro_id=IPR001937 interpro_description=Galactose-1-phosphate uridyl transferase, class I GO=Biological Process: galactose metabolic process (GO:0006012), Molecular Function: UDP-glucose:hexose-1-phosphate uridylyltransferase activity (GO:0008108), Molecular Function: zinc ion binding (GO:0008270))
ACD7_38_6
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4179..4958)
DNA (780bp) protein (260aa)
glycosyl transferase family protein
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=3 to=247 evalue=4.1e-37)
GLYCOSYLTRANSFERASE RELATED (db=HMMPanther db_id=PTHR10859 from=14 to=238 evalue=7.8e-32)
Glycos_transf_2 (db=HMMPfam db_id=PF00535 from=9 to=181 evalue=4.2e-26 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
ACD7_38_7
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5249..6178)
DNA (930bp) protein (310aa)
hypothetical protein
hypothetical protein
Peptide chain release factor 2 n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PBE1_CLOTS (db=UNIREF evalue=1.0e-87 bit_score=327.0 identity=52.9 coverage=98.7096774193548)
seg (db=Seg db_id=seg from=231 to=242)
ACD7_38_8

Not on your lists

comp(6592..7389)
DNA (798bp) protein (266aa)
coiled-coil (db=Coil db_id=coil from=195 to=223 evalue=NA)
coiled-coil (db=Coil db_id=coil from=238 to=259 evalue=NA)
seg (db=Seg db_id=seg from=97 to=108)
Uncharacterized protein {ECO:0000313|EMBL:EKE20921.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD7_38_9
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7417..7725)
DNA (309bp) protein (103aa)
seg (db=Seg db_id=seg from=67 to=96)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
Uncharacterized protein {ECO:0000313|EMBL:KKP68039.1}; TaxID=1618707 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWE1_35_17.;"
ACD7_38_10
GWF1_OD1_35_5, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

7995..9074
DNA (1080bp) protein (360aa)
prfA; peptide chain release factor 1
prfA; peptide chain release factor 1
Peptide chain release factor 1 n=1 Tax=Bacillus halodurans RepID=RF1_BACHD (db=UNIREF evalue=9.0e-101 bit_score=370.0 identity=54.34 coverage=94.7222222222222)
seg (db=Seg db_id=seg from=86 to=100)
ACD7_38_11
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(9335..10210)
DNA (876bp) protein (292aa)
coiled-coil (db=Coil db_id=coil from=174 to=202 evalue=NA)
coiled-coil (db=Coil db_id=coil from=213 to=248 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:KKP68041.1}; TaxID=1618707 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWE1_35_17.;"
ACD7_38_12
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

10625..11635
DNA (1011bp) protein (337aa)
Modification methylase, HemK family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J9B8_DESRM (db=UNIREF evalue=6.0e-23 bit_score=112.0 identity=28.06 coverage=73.5905044510386)
protein-(glutamine-N5) methyltransferase, release factor-specific
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=283 evalue=1.1e-34)
HEMK METHYLTRANSFERASE FAMILY MEMBER (db=HMMPanther db_id=PTHR18895:SF7 from=150 to=335 evalue=2.2e-26)
ACD7_38_13
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(11975..13114)
DNA (1140bp) protein (380aa)
nhaA2; putative lipoprotein
DSBA oxidoreductase n=1 Tax=NC10 bacterium 'Dutch sediment' RepID=D5MF76_9BACT (db=UNIREF evalue=1.0e-29 bit_score=134.0 identity=37.62 coverage=51.3157894736842)
seg (db=Seg db_id=seg from=248 to=258)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
ACD7_38_14
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(13198..13542)
DNA (345bp) protein (115aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=55)
seg (db=Seg db_id=seg from=83 to=98)
seg (db=Seg db_id=seg from=41 to=53)
Uncharacterized protein {ECO:0000313|EMBL:KKP68044.1}; TaxID=1618707 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWE1_35_17.;"
ACD7_38_15
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

13909..14109
DNA (201bp) protein (67aa)
hypothetical protein
Probable cold shock protein scoF n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQQ8_9PLAN (db=UNIREF evalue=5.0e-11 bit_score=70.1 identity=58.73 coverage=91.044776119403)
COLD_SHOCK (db=PatternScan db_id=PS00352 from=14 to=33 evalue=0.0 interpro_id=IPR019844 interpro_description=Cold-shock conserved site)
CSD (db=HMMPfam db_id=PF00313 from=1 to=64 evalue=1.8e-21 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD7_38_16
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14334..14939)
DNA (606bp) protein (202aa)
seg (db=Seg db_id=seg from=88 to=104)
hypothetical protein Tax=GWE1_OD1_ACD7_35_17
ACD7_38_17
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(15114..15314)
DNA (201bp) protein (67aa)
15114..15314 - (rbs_motif=TAAAA rbs_spacer=4bp)
Uncharacterized protein {ECO:0000313|EMBL:KKP68047.1}; TaxID=1618707 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWE1_35_17.;"
ACD7_38_18
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(15548..16126)
DNA (579bp) protein (193aa)
hypothetical protein
seg (db=Seg db_id=seg from=152 to=159)
coiled-coil (db=Coil db_id=coil from=139 to=160 evalue=NA)
ORF6N (db=HMMPfam db_id=PF10543 from=21 to=119 evalue=3.0e-31 interpro_id=IPR018873 interpro_description=KilA-N, DNA-binding domain)
ACD7_38_19
GWE2_OD1_35_164, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16356..16640)
DNA (285bp) protein (95aa)
DNA polymerase beta domain-containing protein region
Nucleotidyltransferase (db=superfamily db_id=SSF81301 from=2 to=94 evalue=2.0e-22)
NTP_transf_2 (db=HMMPfam db_id=PF01909 from=16 to=91 evalue=3.7e-15 interpro_id=IPR002934 interpro_description=Nucleotidyl transferase domain GO=Molecular Function: nucleotidyltransferase activity (GO:0016779))
no description (db=Gene3D db_id=G3DSA:3.30.460.10 from=4 to=92 evalue=2.1e-05)
ACD7_38_20

Not on your lists

comp(16755..17909)
DNA (1155bp) protein (385aa)
group 1 glycosyl transferase
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=1 to=383 evalue=3.7e-64)
MANNOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526:SF29 from=2 to=383 evalue=3.5e-63)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=2 to=383 evalue=3.5e-63)
ACD7_38_21

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comp(18137..18466)
DNA (330bp) protein (110aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=82 to=104)
Uncharacterized protein {ECO:0000313|EMBL:EKE20920.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 21 items

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