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ACD7_64

Alias: ACD7_249.13587.85

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD7_64_1

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comp(51..365)
DNA (315bp) protein (105aa)
Thioredoxin n=1 Tax=Brevibacterium mcbrellneri ATCC 49030 RepID=D4YKV7_9MICO (db=UNIREF evalue=2.0e-28 bit_score=128.0 identity=55.77 coverage=98.0952380952381)
thioredoxin
THIOREDOXIN_1 (db=PatternScan db_id=PS00194 from=22 to=40 evalue=0.0 interpro_id=IPR017937 interpro_description=Thioredoxin, conserved site GO=Biological Process: cell redox homeostasis (GO:0045454))
thioredoxin: thioredoxin (db=HMMTigr db_id=TIGR01068 from=5 to=104 evalue=1.0e-46 interpro_id=IPR005746 interpro_description=Thioredoxin GO=Biological Process: glycerol ether metabolic process (GO:0006662), Molecular Function: electron carrier activity (GO:0009055), Molecular Function: protein disulfide oxidoreductase activity (GO:0015035), Biological Process: cell redox homeostasis (GO:0045454))
ACD7_64_2

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comp(437..3025)
DNA (2589bp) protein (863aa)
Tetratricopeptide TPR_2
SPY protein n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W4R4_MAGSA (db=UNIREF evalue=2.0e-08 bit_score=65.5 identity=21.4 coverage=28.6210892236385)
transmembrane_regions (db=TMHMM db_id=tmhmm from=481 to=503)
seg (db=Seg db_id=seg from=424 to=438)
ACD7_64_3

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3211..5397
DNA (2187bp) protein (729aa)
1A family penicillin-binding protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg (db=Seg db_id=seg from=660 to=674)
seg (db=Seg db_id=seg from=476 to=489)
ACD7_64_4

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comp(5424..5942)
DNA (519bp) protein (173aa)
hypothetical protein
Ferritin-like (db=superfamily db_id=SSF47240 from=47 to=172 evalue=5.4e-16 interpro_id=IPR009078 interpro_description=Ferritin/ribonucleotide reductase-like GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: transition metal ion binding (GO:0046914), Biological Process: oxidation reduction (GO:0055114))
Rubrerythrin (db=HMMPfam db_id=PF02915 from=54 to=170 evalue=6.4e-10 interpro_id=IPR003251 interpro_description=Rubrerythrin GO=Molecular Function: metal ion binding (GO:0046872))
no description (db=Gene3D db_id=G3DSA:1.20.1260.10 from=54 to=168 evalue=5.2e-08 interpro_id=IPR012347 interpro_description=Ferritin-related)
ACD7_64_5
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

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comp(6178..6393)
DNA (216bp) protein (72aa)
6178..6393 - (rbs_motif=AATAA rbs_spacer=15bp)
Uncharacterized protein {ECO:0000313|EMBL:KKP68699.1}; TaxID=1618707 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWE1_35_17.;"
ACD7_64_6

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comp(6590..8062)
DNA (1473bp) protein (491aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=6 Tax=Thermotogaceae RepID=GATB_THEP1 (db=UNIREF evalue=3.0e-135 bit_score=485.0 identity=50.0 coverage=97.1486761710794)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B
GATB (db=PatternScan db_id=PS01234 from=142 to=156 evalue=0.0 interpro_id=IPR017958 interpro_description=Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO=Biological Process: translation (GO:0006412), Molecular Function: carbon-nitrogen ligase activity, with glutamine as amido-N-donor (GO:0016884))
ACD7_64_7

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comp(8225..8764)
DNA (540bp) protein (180aa)
seg (db=Seg db_id=seg from=160 to=171)
seg (db=Seg db_id=seg from=16 to=32)
CYTH-like phosphatases (db=superfamily db_id=SSF55154 from=6 to=156 evalue=1.5e-16 interpro_id=IPR004206 interpro_description=mRNA capping enzyme, beta subunit GO=Molecular Function: polynucleotide 5'-phosphatase activity (GO:0004651), Molecular Function: protein binding (GO:0005515), Biological Process: mRNA capping (GO:0006370), Cellular Component: mRNA cap methyltransferase complex (GO:0031533))
cyaB: putative adenylyl cyclase CyaB (db=HMMTigr db_id=TIGR00318 from=5 to=170 evalue=4.3e-14 interpro_id=IPR008173 interpro_description=Adenylyl cyclase CyaB)
ACD7_64_8
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

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comp(8770..9195)
DNA (426bp) protein (142aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
seg (db=Seg db_id=seg from=111 to=124)
dut: dUTP diphosphatase (db=HMMTigr db_id=TIGR00576 from=2 to=140 evalue=2.5e-50 interpro_id=IPR008181 interpro_description=DeoxyUTP pyrophosphatase domain, subfamily 1, GO=Molecular Function: dUTP diphosphatase activity (GO:0004170), Biological Process: dUTP metabolic process (GO:0046080))
DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE (db=HMMPanther db_id=PTHR11241 from=5 to=141 evalue=2.3e-45)
ACD7_64_9
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

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comp(9269..9871)
DNA (603bp) protein (201aa)
dTMP kinase n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EGN9_9EURY (db=UNIREF evalue=8.0e-35 bit_score=149.0 identity=43.15 coverage=96.0199004975124)
thymidylate kinase (EC:2.7.4.9)
seg (db=Seg db_id=seg from=137 to=153)
Thymidylate_kin (db=HMMPfam db_id=PF02223 from=9 to=191 evalue=2.5e-45 interpro_id=IPR000062 interpro_description=Thymidylate kinase-like GO=Molecular Function: ATP binding (GO:0005524))
ACD7_64_10
GWE2_OD1_35_164, Moranbacteria, Parcubacteria, Bacteria

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comp(9993..11003)
DNA (1011bp) protein (337aa)
thymidylate synthase complementing protein ThyX
seg (db=Seg db_id=seg from=171 to=186)
Thymidylate synthase-complementing protein Thy1 (db=superfamily db_id=SSF69796 from=5 to=335 evalue=3.4e-30 interpro_id=IPR003669 interpro_description=Thymidylate synthase ThyX GO=Biological Process: dTMP biosynthetic process (GO:0006231), Molecular Function: FAD binding (GO:0050660), Molecular Function: thymidylate synthase (FAD) activity (GO:0050797))
Thy1 (db=HMMPfam db_id=PF02511 from=179 to=320 evalue=4.5e-20 interpro_id=IPR003669 interpro_description=Thymidylate synthase ThyX GO=Biological Process: dTMP biosynthetic process (GO:0006231), Molecular Function: FAD binding (GO:0050660), Molecular Function: thymidylate synthase (FAD) activity (GO:0050797))
ACD7_64_11

Not on your lists

comp(11135..12490)
DNA (1356bp) protein (452aa)
hypothetical protein
Thymidylate synthase-complementing protein Thy1 (db=superfamily db_id=SSF69796 from=65 to=245 evalue=2.0e-15 interpro_id=IPR003669 interpro_description=Thymidylate synthase ThyX GO=Biological Process: dTMP biosynthetic process (GO:0006231), Molecular Function: FAD binding (GO:0050660), Molecular Function: thymidylate synthase (FAD) activity (GO:0050797))
Thy1 (db=HMMPfam db_id=PF02511 from=68 to=230 evalue=3.3e-13 interpro_id=IPR003669 interpro_description=Thymidylate synthase ThyX GO=Biological Process: dTMP biosynthetic process (GO:0006231), Molecular Function: FAD binding (GO:0050660), Molecular Function: thymidylate synthase (FAD) activity (GO:0050797))
THYX (db=ProfileScan db_id=PS51331 from=17 to=238 evalue=13.617 interpro_id=IPR003669 interpro_description=Thymidylate synthase ThyX GO=Biological Process: dTMP biosynthetic process (GO:0006231), Molecular Function: FAD binding (GO:0050660), Molecular Function: thymidylate synthase (FAD) activity (GO:0050797))
ACD7_64_12

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comp(12505..13050)
DNA (546bp) protein (182aa)
seg (db=Seg db_id=seg from=2 to=17)
seg (db=Seg db_id=seg from=130 to=142)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=3 to=180 evalue=4.4e-19)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=4 to=180 evalue=5.2e-05)
ACD7_64_13

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comp(13090..13590)
DNA (501bp) protein (167aa)
CMP/dCMP deaminase zinc-binding protein
dCMP deaminase (db=HMMPIR db_id=PIRSF006019 from=4 to=165 evalue=3.0e-45 interpro_id=IPR016473 interpro_description=dCMP deaminase GO=Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (GO:0016810))
no description (db=Gene3D db_id=G3DSA:3.40.140.10 from=13 to=159 evalue=2.7e-36)
DEOXYCYTIDYLATE DEAMINASE (db=HMMPanther db_id=PTHR11086:SF2 from=4 to=153 evalue=6.6e-35)
Displaying 13 items

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