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ACD7_170

Alias: ACD7_26.6512.78

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD7_170_1

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3..515
DNA (513bp) protein (171aa)
ECF subfamily RNA polymerase sigma factor
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=1 to=162 evalue=3.9e-35 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=2 to=92 evalue=2.0e-18 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=1 to=76 evalue=3.5e-16)
ACD7_170_2

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521..1237
DNA (717bp) protein (239aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=108 to=130)
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=95)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
seg (db=Seg db_id=seg from=228 to=238)
ACD7_170_3

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1343..2557
DNA (1215bp) protein (405aa)
RND family efflux transporter, MFP subunit
Periplasmic component of efflux system n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y5I3_9BACT (db=UNIREF evalue=2.0e-23 bit_score=114.0 identity=29.4 coverage=84.1975308641975)
seg (db=Seg db_id=seg from=161 to=175)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
ACD7_170_4

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2737..3420
DNA (684bp) protein (228aa)
ABC transporter
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=143 to=157 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF32 from=2 to=222 evalue=8.2e-110)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=2 to=222 evalue=8.2e-110)
ACD7_170_5

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3709..4884
DNA (1176bp) protein (392aa)
antimicrobial peptide ABC transporter permease
transmembrane_regions (db=TMHMM db_id=tmhmm from=352 to=374)
transmembrane_regions (db=TMHMM db_id=tmhmm from=320 to=342)
transmembrane_regions (db=TMHMM db_id=tmhmm from=265 to=287)
ACD7_170_6

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comp(5158..6435)
DNA (1278bp) protein (426aa)
phosphoesterase PA-phosphatase-like protein
SNARE associated Golgi protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q8Q2_CATAD (db=UNIREF evalue=3.0e-23 bit_score=113.0 identity=36.0 coverage=39.906103286385)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
transmembrane_regions (db=TMHMM db_id=tmhmm from=144 to=166)
ACD7_170_7
unknown

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6511..6576
DNA (66bp) protein (22aa)
6511..6576 + (rbs_motif=TAAA rbs_spacer=4bp)
Displaying 7 items

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