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ACD80_11

Alias: ACD80_46917.70575.24

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Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD80_11_1
ACD80, SR1, Bacteria

Not on your lists

1..810
DNA (810bp) protein (270aa)
seg (db=Seg db_id=seg from=247 to=259)
seg 247..259 Tax=ACD80
hypothetical protein
ACD80_11_2
ACD80, SR1, Bacteria

Not on your lists

comp(897..1535)
DNA (639bp) protein (213aa)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=16 evalue=5.0)
PROKAR_LIPOPROTEIN Tax=ACD80
ACD80_11_3
ACD80, SR1, Bacteria

Not on your lists

comp(1582..2529)
DNA (948bp) protein (316aa)
seg (db=Seg db_id=seg from=30 to=44)
seg (db=Seg db_id=seg from=220 to=231)
seg (db=Seg db_id=seg from=168 to=183)
Peptidase_M23 (db=HMMPfam db_id=PF01551 from=203 to=294 evalue=5.2e-06 interpro_id=IPR016047 interpro_description=Peptidase M23)
ACD80_11_4
unknown

Not on your lists

comp(3123..4181)
DNA (1059bp) protein (353aa)
Chaperone protein DnaJ
Chaperone protein DnaJ n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHA9_9EURY (db=UNIREF evalue=2.0e-37 bit_score=160.0 identity=34.05 coverage=97.4504249291785)
seg (db=Seg db_id=seg from=75 to=114)
seg (db=Seg db_id=seg from=25 to=45)
ACD80_11_5
ACD80, SR1, Bacteria

Not on your lists

4404..4739
DNA (336bp) protein (112aa)
coiled-coil (db=Coil db_id=coil from=73 to=94 evalue=NA)
coiled-coil 73..94 Tax=ACD80
ACD80_11_6
ACD80, SR1, Bacteria

Not on your lists

4767..6353
DNA (1587bp) protein (529aa)
seg (db=Seg db_id=seg from=67 to=77)
seg 67..77 Tax=ACD80
ACD80_11_7
ACD80, SR1, Bacteria

Not on your lists

comp(6403..7062)
DNA (660bp) protein (220aa)
seg (db=Seg db_id=seg from=44 to=54)
seg (db=Seg db_id=seg from=87 to=98)
CAP (db=HMMPfam db_id=PF00188 from=85 to=143 evalue=0.00026 interpro_id=IPR014044 interpro_description=SCP-like extracellular)
seg 44..54 Tax=ACD80
ACD80_11_8
unknown

Not on your lists

comp(7113..7760)
DNA (648bp) protein (216aa)
Putative membrane protein n=1 Tax=Streptomyces ambofaciens ATCC 23877 RepID=A0ACW5_STRAM (db=UNIREF evalue=5.0e-10 bit_score=67.8 identity=30.7 coverage=51.3888888888889)
SCP-like extracellular protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=46)
CAP (db=HMMPfam db_id=PF00188 from=104 to=203 evalue=2.8e-12 interpro_id=IPR014044 interpro_description=SCP-like extracellular)
ACD80_11_9
ACD80, SR1, Bacteria

Not on your lists

comp(7954..8133)
DNA (180bp) protein (60aa)
7954..8133 - (rbs_motif=TTTA rbs_spacer=14bp)
hypothetical protein Tax=ACD80
ACD80_11_10
unknown

Not on your lists

comp(8214..9290)
DNA (1077bp) protein (359aa)
Glycosyl transferase family 4
Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P0L2_9BACE (db=UNIREF evalue=8.0e-15 bit_score=85.1 identity=26.65 coverage=86.908077994429)
transmembrane_regions (db=TMHMM db_id=tmhmm from=327 to=346)
transmembrane_regions (db=TMHMM db_id=tmhmm from=304 to=321)
11 transmembrane domains: pore? Swiss-Model: no result Jill Banfield (11/16/12)
ACD80_11_11
ACD80, SR1, Bacteria

Not on your lists

comp(9374..10981)
DNA (1608bp) protein (536aa)
seg (db=Seg db_id=seg from=183 to=207)
seg (db=Seg db_id=seg from=101 to=116)
coiled-coil (db=Coil db_id=coil from=293 to=314 evalue=NA)
coiled-coil (db=Coil db_id=coil from=248 to=290 evalue=NA)
ACD80_11_12
ACD80, SR1, Bacteria

Not on your lists

comp(11000..11290)
DNA (291bp) protein (97aa)
11000..11290 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD80
hypothetical protein
ACD80_11_13
ACD80, SR1, Bacteria

Not on your lists

comp(11241..11462)
DNA (222bp) protein (74aa)
11241..11462 - (rbs_motif=TTATA rbs_spacer=15bp)
hypothetical protein Tax=ACD80
ACD80_11_14
ACD80, SR1, Bacteria

Not on your lists

11494..13374
DNA (1881bp) protein (627aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ERV8_AMOA5 (db=UNIREF evalue=1.0e-132 bit_score=477.0 identity=41.11 coverage=90.2711323763955)
coiled-coil (db=Coil db_id=coil from=50 to=71 evalue=NA)
ACD80_11_15
ACD80, SR1, Bacteria

Not on your lists

comp(13471..13773)
DNA (303bp) protein (101aa)
13471..13773 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD80
ACD80_11_16
ACD80, SR1, Bacteria

Not on your lists

13952..15343
DNA (1392bp) protein (464aa)
hypothetical protein
hypothetical protein
Asparaginyl-tRNA synthetase n=1 Tax=Clostridium tetani RepID=SYN_CLOTE (db=UNIREF evalue=0.0 bit_score=666.0 identity=66.09 coverage=99.5689655172414)
asnS: asparaginyl-tRNA synthetase (db=HMMTigr db_id=TIGR00457 from=3 to=463 evalue=7.2e-270 interpro_id=IPR004522 interpro_description=Asparaginyl-tRNA synthetase, class IIb GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: asparagine-tRNA ligase activity (GO:0004816), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: asparaginyl-tRNA aminoacylation (GO:0006421))
ACD80_11_17
unknown

Not on your lists

15361..15762
DNA (402bp) protein (134aa)
Histidine triad (HIT) protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGW3_9EURY (db=UNIREF evalue=4.0e-28 bit_score=127.0 identity=51.85 coverage=79.8507462686567)
Hit; diadenosine tetraphosphate
HISTIDINE TRIAD (HIT) PROTEIN (db=HMMPanther db_id=PTHR23089 from=19 to=109 evalue=1.3e-14 interpro_id=IPR001310 interpro_description=Histidine triad (HIT) protein)
HIT_1 (db=PatternScan db_id=PS00892 from=86 to=104 evalue=0.0 interpro_id=IPR019808 interpro_description=Histidine triad, conserved site)
cell-cycle regulation (ARMAN most similar!) Jill Banfield (11/16/12)
ACD80_11_18
ACD80, SR1, Bacteria

Not on your lists

15800..16513
DNA (714bp) protein (238aa)
hypothetical protein
Xylose isomerase-like (db=superfamily db_id=SSF51658 from=25 to=237 evalue=4.2e-08 interpro_id=IPR013022 interpro_description=Xylose isomerase-like, TIM barrel domain)
hypothetical protein alias=ACD80_C00011G00018,ACD80_46917.70575.24G0018,ACD80_46917.70575.24_18 id=132070 tax=ACD80 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria organism_group=SR1
hypothetical protein Tax=ACD80
ACD80_11_19
unknown

Not on your lists

16527..17141
DNA (615bp) protein (205aa)
Probable TesA-like protease n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YQM8_9FLAO (db=UNIREF evalue=4.0e-16 bit_score=88.2 identity=31.66 coverage=93.1707317073171)
SGNH hydrolase (db=superfamily db_id=SSF52266 from=2 to=201 evalue=1.9e-25 interpro_id=IPR013830 interpro_description=Esterase, SGNH hydrolase-type)
no description (db=Gene3D db_id=G3DSA:3.40.50.1110 from=4 to=198 evalue=3.6e-16 interpro_id=IPR013831 interpro_description=Esterase, SGNH hydrolase-type, subgroup GO=Molecular Function: hydrolase activity (GO:0016787))
Lipase_GDSL (db=HMMPfam db_id=PF00657 from=10 to=191 evalue=1.7e-15 interpro_id=IPR001087 interpro_description=Lipase, GDSL GO=Biological Process: lipid metabolic process (GO:0006629), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
ACD80_11_20
unknown

Not on your lists

17587..18879
DNA (1293bp) protein (431aa)
Citrate transporter
Na+/H+ antiporter, probable n=1 Tax=Prevotella veroralis F0319 RepID=C9MN43_9BACT (db=UNIREF evalue=5.0e-43 bit_score=179.0 identity=34.62 coverage=93.5034802784223)
transmembrane_regions (db=TMHMM db_id=tmhmm from=412 to=429)
transmembrane_regions (db=TMHMM db_id=tmhmm from=369 to=391)
ACD80_11_21
unknown

Not on your lists

19048..19533
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HUM5_9FIRM (db=UNIREF evalue=3.0e-29 bit_score=130.0 identity=43.31 coverage=95.679012345679)
YbaK/prolyl-tRNA synthetase associated region
YbaK/ProRS associated domain (db=superfamily db_id=SSF55826 from=1 to=161 evalue=2.3e-38 interpro_id=IPR007214 interpro_description=YbaK/aminoacyl-tRNA synthetase-associated domain)
no description (db=Gene3D db_id=G3DSA:3.90.960.10 from=2 to=159 evalue=7.4e-38 interpro_id=IPR007214 interpro_description=YbaK/aminoacyl-tRNA synthetase-associated domain)
ACD80_11_22
ACD80, SR1, Bacteria

Not on your lists

19543..20163
DNA (621bp) protein (207aa)
hypothetical protein
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=41 to=200 evalue=5.0e-14)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=40 to=201 evalue=3.5e-09)
hypothetical protein; K07002 alias=ACD80_C00011G00022,ACD80_46917.70575.24_22,ACD80_46917.70575.24G0022 id=132081 tax=ACD80 species=Bacillus halodurans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=SR1
ACD80_11_23
ACD80, SR1, Bacteria

Not on your lists

20181..21665
DNA (1485bp) protein (495aa)
seg (db=Seg db_id=seg from=443 to=454)
seg 443..454 Tax=ACD80
ACD80_11_24
ACD80, SR1, Bacteria

Not on your lists

comp(21699..23981)
DNA (2283bp) protein (761aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7X7_9CLOT (db=UNIREF evalue=0.0 bit_score=644.0 identity=50.14 coverage=93.2982917214192)
seg (db=Seg db_id=seg from=472 to=483)
ACD80_11_25
ACD80, SR1, Bacteria

Not on your lists

24106..24954
DNA (849bp) protein (283aa)
hypothetical protein; K01081 5'-nucleotidase [EC:3.1.3.5] (db=KEGG evalue=5.0e-42 bit_score=174.0 identity=35.4 coverage=94.3462897526502)
UMPH-1 (db=HMMPfam db_id=PF05822 from=36 to=280 evalue=2.6e-63)
NT5C3 HYDROLASE (db=HMMPanther db_id=PTHR13045 from=1 to=281 evalue=1.9e-42 interpro_id=IPR006434 interpro_description=HAD-superfamily hydrolase, subfamily IE GO=Molecular Function: magnesium ion binding (GO:0000287), Cellular Component: cytoplasm (GO:0005737), Molecular Function: 5'-nucleotidase activity (GO:0008253))
HAD-like (db=superfamily db_id=SSF56784 from=8 to=281 evalue=1.7e-15)
ACD80_11_26
unknown

Not on your lists

comp(24987..25646)
DNA (660bp) protein (220aa)
NUDIX hydrolase
Nudix hydrolase n=2 Tax=Synechococcus sp. PCC 7002 RepID=Q83ZD0_SYNP2 (db=UNIREF evalue=7.0e-50 bit_score=200.0 identity=49.01 coverage=90.9090909090909)
Nudix (db=superfamily db_id=SSF55811 from=3 to=148 evalue=1.3e-34 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=146 to=219 evalue=9.8e-19)
ACD80_11_27
ACD80, SR1, Bacteria

Not on your lists

comp(25744..27363)
DNA (1620bp) protein (540aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SAW4_LEPBA (db=UNIREF evalue=2.0e-109 bit_score=400.0 identity=41.14 coverage=98.3333333333333)
seg (db=Seg db_id=seg from=349 to=359)
ACD80_11_28
ACD80, SR1, Bacteria

Not on your lists

comp(27391..28323)
DNA (933bp) protein (311aa)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=92 to=291 evalue=1.7e-20)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=109 to=238 evalue=1.4e-09)
MTS (db=HMMPfam db_id=PF05175 from=124 to=235 evalue=1.5e-09 interpro_id=IPR007848 interpro_description=Methyltransferase small GO=Molecular Function: methyltransferase activity (GO:0008168))
METHYLTRANSFERASE (db=HMMPanther db_id=PTHR18895 from=107 to=235 evalue=2.1e-08)
Swiss-Model: pretty good model to 1zq9B: dimethyladenosine transferase (transcription regulation?) Jill Banfield (11/16/12)
ACD80_11_29
ACD80, SR1, Bacteria

Not on your lists

comp(28373..29386)
DNA (1014bp) protein (338aa)
Phosphoglycerate mutase-like (db=superfamily db_id=SSF53254 from=53 to=317 evalue=1.4e-19)
PGAM (db=HMMPfam db_id=PF00300 from=56 to=277 evalue=4.3e-11 interpro_id=IPR013078 interpro_description=Histidine phosphatase superfamily, clade-1)
no description (db=Gene3D db_id=G3DSA:3.40.50.1240 from=53 to=312 evalue=6.2e-08)
Phosphoglycerate mutase-like Tax=ACD80
Swiss-Model: 3f2if: unacceptable score (meaning uncertain) Jill Banfield (11/16/12)
ACD80_11_30
ACD80, SR1, Bacteria

Not on your lists

comp(29411..30637)
DNA (1227bp) protein (409aa)
29411..30637 - (rbs_motif=TTTATA rbs_spacer=13bp)
hypothetical protein Tax=ACD80
Displaying items 1-30 of 69 in total

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