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ACD80_27

Alias: ACD80_8724.12410.19

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD80_27_1
ACD80, SR1, Bacteria

Not on your lists

comp(139..579)
DNA (441bp) protein (147aa)
coiled-coil (db=Coil db_id=coil from=64 to=92 evalue=NA)
seg (db=Seg db_id=seg from=67 to=93)
coiled-coil 64..92 Tax=ACD80
ACD80_27_2
ACD80, SR1, Bacteria

Not on your lists

comp(601..705)
DNA (105bp) protein (35aa)
601..705 - (rbs_motif=TTAATT rbs_spacer=5bp)
hypothetical protein Tax=ACD80
ACD80_27_3
ACD80, SR1, Bacteria

Not on your lists

847..2127
DNA (1281bp) protein (427aa)
hypothetical protein
hypothetical protein
Serine hydroxymethyltransferase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1X1_DESAD (db=UNIREF evalue=3.0e-134 bit_score=482.0 identity=53.88 coverage=96.0187353629977)
coiled-coil (db=Coil db_id=coil from=400 to=421 evalue=NA)
ACD80_27_4
unknown

Not on your lists

2309..2995
DNA (687bp) protein (229aa)
hypothetical protein
ribosomal small subunit pseudouridine synthase A n=2 Tax=Fusobacterium RepID=UPI0001BC42E2 (db=UNIREF evalue=1.0e-38 bit_score=163.0 identity=41.05 coverage=98.6899563318777)
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600:SF2 from=5 to=226 evalue=7.6e-40)
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600 from=5 to=226 evalue=7.6e-40)
ACD80_27_5
ACD80, SR1, Bacteria

Not on your lists

2979..3242
DNA (264bp) protein (88aa)
2979..3242 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD80
ACD80_27_6
ACD80, SR1, Bacteria

Not on your lists

3870..4265
DNA (396bp) protein (132aa)
3870..4265 + (rbs_motif=TTTAT rbs_spacer=14bp)
hypothetical protein Tax=ACD80
ACD80_27_7
ACD80, SR1, Bacteria

Not on your lists

4392..4913
DNA (522bp) protein (174aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=36)
seg (db=Seg db_id=seg from=88 to=118)
seg (db=Seg db_id=seg from=71 to=85)
seg (db=Seg db_id=seg from=48 to=64)
ACD80_27_8
ACD80, SR1, Bacteria

Not on your lists

4940..6250
DNA (1311bp) protein (437aa)
hypothetical protein
(Trans)glycosidases (db=superfamily db_id=SSF51445 from=30 to=317 evalue=1.1e-28 interpro_id=IPR017853 interpro_description=Glycoside hydrolase, catalytic core)
no description (db=Gene3D db_id=G3DSA:3.20.20.80 from=81 to=310 evalue=5.3e-12 interpro_id=IPR013781 interpro_description=Glycoside hydrolase, subgroup, catalytic core GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: cation binding (GO:0043169))
Dockerin type 1 alias=ACD80_8724.12410.19G0008,ACD80_8724.12410.19_8,ACD80_C00027G00008 id=132394 tax=ACD80 species=Clostridium cellulovorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=SR1
ACD80_27_9
ACD80, SR1, Bacteria

Not on your lists

comp(6247..6786)
DNA (540bp) protein (180aa)
coiled-coil (db=Coil db_id=coil from=28 to=49 evalue=NA)
coiled-coil (db=Coil db_id=coil from=93 to=118 evalue=NA)
seg (db=Seg db_id=seg from=39 to=50)
seg (db=Seg db_id=seg from=114 to=124)
ACD80_27_10
ACD80, SR1, Bacteria

Not on your lists

comp(6813..8384)
DNA (1572bp) protein (524aa)
seg (db=Seg db_id=seg from=271 to=281)
seg 271..281 Tax=ACD80
ACD80_27_11
ACD80, SR1, Bacteria

Not on your lists

comp(8467..8970)
DNA (504bp) protein (168aa)
8467..8970 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD80
ACD80_27_12
ACD80, SR1, Bacteria

Not on your lists

comp(9048..10163)
DNA (1116bp) protein (372aa)
ATPase, AAA family n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2J3_NITSB (db=UNIREF evalue=5.0e-82 bit_score=308.0 identity=49.34 coverage=80.6451612903226)
MoxR-like ATPase
MoxR-like ATPase
seg (db=Seg db_id=seg from=3 to=21)
ACD80_27_13
ACD80, SR1, Bacteria

Not on your lists

10286..11140
DNA (855bp) protein (285aa)
mechanosensitive ion channel MscS
seg (db=Seg db_id=seg from=35 to=44)
transmembrane_regions (db=TMHMM db_id=tmhmm from=101 to=123)
seg (db=Seg db_id=seg from=198 to=214)
ACD80_27_14
ACD80, SR1, Bacteria

Not on your lists

comp(10960..11388)
DNA (429bp) protein (143aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=95)
seg (db=Seg db_id=seg from=78 to=91)
transmembrane_regions 73..95 Tax=ACD80
ACD80_27_15

Not on your lists

11533..12381
DNA (849bp) protein (283aa)
Prolipoprotein diacylglyceryl transferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
transmembrane_regions (db=TMHMM db_id=tmhmm from=256 to=275)
Displaying 15 items

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