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ACD80_65

Alias: ACD80_106949.5430.14

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD80_65_1
ACD80, SR1, Bacteria

Not on your lists

comp(3..428)
DNA (426bp) protein (142aa)
seg (db=Seg db_id=seg from=14 to=25)
transmembrane_regions (db=TMHMM db_id=tmhmm from=6 to=28)
transmembrane_regions 6..28 Tax=ACD80
ACD80_65_2
ACD80, SR1, Bacteria

Not on your lists

comp(579..1202)
DNA (624bp) protein (208aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=47 to=58)
PROKAR_NTER_METHYL (db=PatternScan db_id=PS00409 from=5 to=25 evalue=0.0 interpro_id=IPR001120 interpro_description=Prokaryotic N-terminal methylation site)
Pili subunits (db=superfamily db_id=SSF54523 from=7 to=135 evalue=3.9e-12)
ACD80_65_3
ACD80, SR1, Bacteria

Not on your lists

comp(1377..2015)
DNA (639bp) protein (213aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=4 to=27 evalue=9.0e-06 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
transmembrane_regions 5..27 Tax=ACD80
hypothetical protein
ACD80_65_4
ACD80, SR1, Bacteria

Not on your lists

comp(2046..2543)
DNA (498bp) protein (166aa)
seg (db=Seg db_id=seg from=7 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
Pili subunits (db=superfamily db_id=SSF54523 from=5 to=46 evalue=3.0e-07)
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=2 to=25 evalue=0.00018 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
ACD80_65_5
ACD80, SR1, Bacteria

Not on your lists

2804..3079
DNA (276bp) protein (92aa)
seg (db=Seg db_id=seg from=64 to=73)
DUF156 (db=HMMPfam db_id=PF02583 from=4 to=87 evalue=4.6e-14 interpro_id=IPR003735 interpro_description=Protein of unknown function DUF156)
seg 64..73 Tax=ACD80
hypothetical protein
ACD80_65_6
ACD80, SR1, Bacteria

Not on your lists

3110..3331
DNA (222bp) protein (74aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
DUF2078 (db=HMMPfam db_id=PF09851 from=4 to=72 evalue=1.2e-11 interpro_id=IPR018649 interpro_description=Protein of unknown function DUF2078, membrane)
transmembrane_regions 10..32 Tax=ACD80
ACD80_65_7
ACD80, SR1, Bacteria

Not on your lists

3341..3730
DNA (390bp) protein (130aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions 7..29 Tax=ACD80
ACD80_65_8
ACD80, SR1, Bacteria

Not on your lists

3833..5143
DNA (1311bp) protein (437aa)
heavy metal transport/detoxification protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=194 to=216)
seg (db=Seg db_id=seg from=185 to=204)
seg (db=Seg db_id=seg from=168 to=182)
ACD80_65_9
ACD80, SR1, Bacteria

Not on your lists

5386..5466
DNA (81bp) protein (27aa)
seg (db=Seg db_id=seg from=2 to=18)
seg 2..18 Tax=ACD80
Displaying 9 items

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