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ACD81_1

Alias: ACD81_38278.5121.6

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD81_1_1

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3..563
-----------------
DNA (561bp)
protein (187aa)
Holliday junction DNA helicase n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VU28_9FLAO (db=UNIREF evalue=2.0e-37 bit_score=158.0 identity=47.06 coverage=89.3048128342246)
hypothetical protein
AAA (db=PatternScan db_id=PS00674 from=64 to=82 evalue=0.0 interpro_id=IPR003960 interpro_description=ATPase, AAA-type, conserved site GO=Molecular Function: ATP binding (GO:0005524))
AAA-FAMILY ATPASE (db=HMMPanther db_id=PTHR23077 from=7 to=182 evalue=1.1e-40)
ACD81_1_2

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571..891
-----------------
DNA (321bp)
protein (107aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=84)
Uncharacterized protein {ECO:0000313|EMBL:EKD23719.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD81_1_3

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897..1025
-----------------
DNA (129bp)
protein (43aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
Uncharacterized protein {ECO:0000313|EMBL:EKD23720.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD81_1_4

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1047..1901
-----------------
DNA (855bp)
protein (285aa)
signal peptide peptidase SppA, 36K type
transmembrane_regions (db=TMHMM db_id=tmhmm from=11 to=33)
SppA_dom: signal peptide peptidase SppA, 36K (db=HMMTigr db_id=TIGR00706 from=53 to=274 evalue=5.4e-43 interpro_id=IPR004635 interpro_description=Peptidase S49, SppA GO=Biological Process: proteolysis (GO:0006508), Molecular Function: peptidase activity (GO:0008233))
ClpP/crotonase (db=superfamily db_id=SSF52096 from=31 to=263 evalue=2.2e-34)
ACD81_1_5

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1965..2459
-----------------
DNA (495bp)
protein (165aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
seg (db=Seg db_id=seg from=26 to=46)
Uncharacterized protein {ECO:0000313|EMBL:EKD23722.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD81_1_6

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comp(2483..3193)
-----------------
DNA (711bp)
protein (237aa)
2483..3193 - (rbs_motif=ATAA rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD23723.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD81_1_7

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comp(3218..3580)
-----------------
DNA (363bp)
protein (121aa)
seg (db=Seg db_id=seg from=15 to=28)
Uncharacterized protein {ECO:0000313|EMBL:EKD23724.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD81_1_8

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comp(3827..5155)
-----------------
DNA (1329bp)
protein (443aa)
recombinase
coiled-coil (db=Coil db_id=coil from=328 to=349 evalue=NA)
Recombinase (db=HMMPfam db_id=PF07508 from=117 to=202 evalue=1.8e-09 interpro_id=IPR011109 interpro_description=Recombinase)
Resolvase-like (db=superfamily db_id=SSF53041 from=2 to=95 evalue=1.1e-07 interpro_id=IPR006119 interpro_description=Resolvase, N-terminal GO=Molecular Function: recombinase activity (GO:0000150), Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310))
Displaying 8 items

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