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ACD81_33

Alias: ACD81_232.11289.53

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD81_33_1
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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comp(1..909)
-----------------
DNA (909bp)
protein (303aa)
seg (db=Seg db_id=seg from=88 to=109)
seg (db=Seg db_id=seg from=192 to=235)
seg (db=Seg db_id=seg from=171 to=188)
seg (db=Seg db_id=seg from=123 to=131)
ACD81_33_2
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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1063..1584
-----------------
DNA (522bp)
protein (174aa)
hemolysin
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
DUF333 (db=HMMPfam db_id=PF03891 from=40 to=88 evalue=5.2e-18 interpro_id=IPR005590 interpro_description=Protein of unknown function DUF333)
MliC (db=HMMPfam db_id=PF09864 from=102 to=166 evalue=2.2e-11 interpro_id=IPR018660 interpro_description=Protein of unknown function DUF2091, periplasmic)
ACD81_33_3
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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comp(1665..2117)
-----------------
DNA (453bp)
protein (151aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=28)
seg (db=Seg db_id=seg from=12 to=19)
seg (db=Seg db_id=seg from=127 to=134)
Uncharacterized protein {ECO:0000313|EMBL:KKT43618.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_33_4
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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comp(2133..3356)
-----------------
DNA (1224bp)
protein (408aa)
multidrug ABC transporter substrate-binding protein
seg (db=Seg db_id=seg from=40 to=58)
transmembrane_regions (db=TMHMM db_id=tmhmm from=369 to=391)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
ACD81_33_5
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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comp(3343..4059)
-----------------
DNA (717bp)
protein (239aa)
ABC transporter
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=143 to=157 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF32 from=2 to=223 evalue=2.0e-113)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=2 to=223 evalue=2.0e-113)
ACD81_33_6
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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comp(4063..5841)
-----------------
DNA (1779bp)
protein (593aa)
RND family efflux transporter MFP subunit
seg (db=Seg db_id=seg from=563 to=578)
seg (db=Seg db_id=seg from=394 to=407)
seg (db=Seg db_id=seg from=313 to=326)
ACD81_33_7
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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comp(6004..6237)
-----------------
DNA (234bp)
protein (78aa)
phnA protein
Prokaryotic SH3-related domain (db=superfamily db_id=SSF82057 from=4 to=77 evalue=1.2e-26)
PhnA (db=HMMPfam db_id=PF03831 from=9 to=62 evalue=1.1e-24 interpro_id=IPR013988 interpro_description=PhnA protein, C-terminal)
PhnA-like protein {ECO:0000313|EMBL:KKT43614.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_33_8

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comp(7199..7576)
-----------------
DNA (378bp)
protein (126aa)
7199..7576 - (rbs_motif=ATAA rbs_spacer=4bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD24081.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD81_33_9
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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comp(7665..8948)
-----------------
DNA (1284bp)
protein (428aa)
Putative uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BBI1_9PORP (db=UNIREF evalue=5.0e-23 bit_score=112.0 identity=48.7 coverage=26.6355140186916)
hypothetical protein
seg (db=Seg db_id=seg from=286 to=303)
transmembrane_regions (db=TMHMM db_id=tmhmm from=286 to=303)
ACD81_33_10
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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9229..9924
-----------------
DNA (696bp)
protein (232aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Synechococcus sp. RS9916 RepID=Q05V84_9SYNE (db=UNIREF evalue=1.0e-18 bit_score=96.7 identity=35.96 coverage=79.7413793103448)
seg (db=Seg db_id=seg from=207 to=227)
seg (db=Seg db_id=seg from=127 to=137)
ACD81_33_11
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(9939..10331)
-----------------
DNA (393bp)
protein (131aa)
histidine kinase
Sensor protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GLJ7_9DELT (db=UNIREF evalue=9.0e-12 bit_score=72.4 identity=50.65 coverage=54.9618320610687)
seg (db=Seg db_id=seg from=6 to=20)
CheY-like (db=superfamily db_id=SSF52172 from=2 to=127 evalue=3.9e-25 interpro_id=IPR011006 interpro_description=CheY-like)
ACD81_33_12

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comp(10450..10707)
-----------------
DNA (258bp)
protein (86aa)
hypothetical protein
Thioredoxin-like (db=superfamily db_id=SSF52833 from=1 to=82 evalue=8.1e-08 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
Thioredoxin (db=HMMPfam db_id=PF00085 from=1 to=51 evalue=4.5e-05 interpro_id=IPR013766 interpro_description=Thioredoxin domain GO=Biological Process: cell redox homeostasis (GO:0045454))
hypothetical protein, conserved alias=ACD81_C00033G00012,ACD81_232.11289.53G0012,ACD81_232.11289.53_12 id=133560 tax=ACD81 species=Guillardia theta genus=Guillardia taxon_order=Pyrenomonadales taxon_class=Cryptophyta phylum=unknown organism_group=OD1, not OD1-i organism_desc=OD1
ACD81_33_13
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(10778..11350)
-----------------
DNA (573bp)
protein (191aa)
hypothetical protein
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=1 to=173 evalue=2.0e-20)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=1 to=184 evalue=2.1e-18)
Abhydrolase_1 (db=HMMPfam db_id=PF00561 from=41 to=111 evalue=4.5e-07 interpro_id=IPR000073 interpro_description=Alpha/beta hydrolase fold-1)
Displaying 13 items

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