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ACD81_58

Alias: ACD81_25.11612.54

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD81_58_1
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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3..713
-----------------
DNA (711bp)
protein (237aa)
Undecaprenyl-diphosphatase
seg (db=Seg db_id=seg from=226 to=236)
seg (db=Seg db_id=seg from=86 to=97)
transmembrane_regions (db=TMHMM db_id=tmhmm from=55 to=72)
ACD81_58_2
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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839..1468
-----------------
DNA (630bp)
protein (210aa)
839..1468 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKT43204.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_58_3
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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1560..1871
-----------------
DNA (312bp)
protein (104aa)
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit C
Aspartyl/glutamyl-tRNA amidotransferase subunit C n=1 Tax=Lactobacillus vaginalis ATCC 49540 RepID=C2EVE0_9LACO (db=UNIREF evalue=2.0e-12 bit_score=75.1 identity=39.22 coverage=95.1923076923077)
gatC: glutamyl-tRNA(Gln) and/or aspartyl-tRN (db=HMMTigr db_id=TIGR00135 from=4 to=100 evalue=5.9e-27 interpro_id=IPR003837 interpro_description=Glu-tRNAGln amidotransferase, C subunit GO=Biological Process: regulation of translational fidelity (GO:0006450))
Glu-tRNAGln amidotransferase C subunit (db=superfamily db_id=SSF141000 from=3 to=98 evalue=1.4e-24)
ACD81_58_4
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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1882..3339
-----------------
DNA (1458bp)
protein (486aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=GATA_CARHZ (db=UNIREF evalue=2.0e-138 bit_score=496.0 identity=59.08 coverage=96.2962962962963)
seg (db=Seg db_id=seg from=151 to=173)
ACD81_58_5
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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3323..3850
-----------------
DNA (528bp)
protein (176aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=29 to=45)
Uncharacterized protein {ECO:0000313|EMBL:KKT43207.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_58_6
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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3856..4137
-----------------
DNA (282bp)
protein (94aa)
3856..4137 + (rbs_motif=ATAA rbs_spacer=5bp)
Uncharacterized protein {ECO:0000313|EMBL:KKT43208.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_58_7
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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comp(4160..5140)
-----------------
DNA (981bp)
protein (327aa)
DNA_pol3_delta (db=HMMPfam db_id=PF06144 from=50 to=225 evalue=8.7e-10 interpro_id=IPR010372 interpro_description=DNA polymerase III, delta GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Cellular Component: DNA polymerase III complex (GO:0009360))
Uncharacterized protein {ECO:0000313|EMBL:KKT43209.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_58_8
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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5151..5828
-----------------
DNA (678bp)
protein (226aa)
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
seg (db=Seg db_id=seg from=68 to=80)
tRNA-(m1G37) methyltransferase (db=HMMPIR db_id=PIRSF000386 from=1 to=225 evalue=1.4e-75 interpro_id=IPR002649 interpro_description=tRNA (guanine-N1-)-methyltransferase, bacteria GO=Molecular Function: RNA binding (GO:0003723), Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA (guanine-N1-)-methyltransferase activity (GO:0009019))
trmD: tRNA (guanine-N1)-methyltransferase (db=HMMTigr db_id=TIGR00088 from=1 to=218 evalue=6.7e-71 interpro_id=IPR002649 interpro_description=tRNA (guanine-N1-)-methyltransferase, bacteria GO=Molecular Function: RNA binding (GO:0003723), Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA (guanine-N1-)-methyltransferase activity (GO:0009019))
ACD81_58_9
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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5938..6798
-----------------
DNA (861bp)
protein (287aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=80 to=91)
Uncharacterized protein {ECO:0000313|EMBL:KKT43211.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_58_10
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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6822..7355
-----------------
DNA (534bp)
protein (178aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
Uncharacterized protein {ECO:0000313|EMBL:KKT43212.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_58_11
GWC2_OD1_ACD81_39_22, Wolfebacteria, Parcubacteria, Bacteria

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7493..7759
-----------------
DNA (267bp)
protein (89aa)
SSU ribosomal protein S15P
30S ribosomal protein S15 n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B772_9FIRM (db=UNIREF evalue=4.0e-22 bit_score=106.0 identity=55.68 coverage=97.752808988764)
RIBOSOMAL_S15 (db=PatternScan db_id=PS00362 from=38 to=68 evalue=0.0 interpro_id=IPR000589 interpro_description=Ribosomal protein S15 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
S15_bact: ribosomal protein S15 (db=HMMTigr db_id=TIGR00952 from=3 to=88 evalue=1.3e-46 interpro_id=IPR005290 interpro_description=Ribosomal protein S15, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD81_58_12
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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7854..8387
-----------------
DNA (534bp)
protein (178aa)
hypothetical protein
DUF88 (db=HMMPfam db_id=PF01936 from=7 to=160 evalue=1.4e-31)
protein of unknown function DUF88 alias=ACD81_25.11612.54G0012,ACD81_25.11612.54_12,ACD81_C00058G00012 id=133853 tax=ACD81 species=Halogeometricum borinquense genus=Halogeometricum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota organism_group=OD1, not OD1-i organism_desc=OD1
Uncharacterized protein {ECO:0000313|EMBL:KKT43214.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_58_13
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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8493..10919
-----------------
DNA (2427bp)
protein (809aa)
pnpA; polynucleotide phosphorylase
pnpA; polynucleotide phosphorylase
Polyribonucleotide nucleotidyltransferase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSC0_9FIRM (db=UNIREF evalue=1.0e-177 bit_score=627.0 identity=46.74 coverage=86.1557478368356)
seg (db=Seg db_id=seg from=723 to=764)
ACD81_58_14
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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comp(11113..11544)
-----------------
DNA (432bp)
protein (144aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=20 to=34)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=24 evalue=6.0)
Uncharacterized protein {ECO:0000313|EMBL:KKT43216.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
Displaying 14 items

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