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ACD81_60

Alias: ACD81_1527.2605.56

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD81_60_1
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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comp(148..792)
-----------------
DNA (645bp)
protein (215aa)
Putative uncharacterized protein n=1 Tax=Bacillus cereus Rock3-44 RepID=C2WFZ9_BACCE (db=UNIREF evalue=3.0e-08 bit_score=61.6 identity=26.34 coverage=87.4418604651163)
Homing endonucleases (db=superfamily db_id=SSF55608 from=8 to=89 evalue=6.5e-08)
Homing endonucleases (db=superfamily db_id=SSF55608 from=101 to=191 evalue=1.2e-06)
Intein-containing protein {ECO:0000313|EMBL:KKT43161.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_60_2

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comp(911..1234)
-----------------
DNA (324bp)
protein (108aa)
50S ribosomal protein L19 n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A7I1_THEAQ (db=UNIREF evalue=3.0e-17 bit_score=90.9 identity=45.92 coverage=87.962962962963)
rplS; 50S ribosomal protein L19
Ribosomal_L19 (db=HMMPfam db_id=PF01245 from=5 to=102 evalue=1.4e-28 interpro_id=IPR001857 interpro_description=Ribosomal protein L19 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMAL PROTEIN L19 (db=HMMPanther db_id=PTHR15680 from=6 to=106 evalue=8.3e-22 interpro_id=IPR001857 interpro_description=Ribosomal protein L19 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD81_60_3
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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1324..1884
-----------------
DNA (561bp)
protein (187aa)
1324..1884 + (rbs_motif=ATA rbs_spacer=8bp)
Uncharacterized protein {ECO:0000313|EMBL:KKT43159.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_60_4
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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comp(1927..2667)
-----------------
DNA (741bp)
protein (247aa)
rluD; ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-)
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=1 to=233 evalue=2.1e-52 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
RIBOSOMAL PSEUDOURIDINE SYNTHASE (db=HMMPanther db_id=PTHR10436 from=1 to=208 evalue=3.2e-50)
PseudoU_synth_2 (db=HMMPfam db_id=PF00849 from=6 to=175 evalue=3.8e-33 interpro_id=IPR006145 interpro_description=Pseudouridine synthase, RsuA and RluB/C/D/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
Displaying 4 items

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