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ACD81_20_10

Organism: ACD81

near complete RP 45 / 55 MC: 11 BSCG 43 / 51 MC: 5 ASCG 0 / 38
Location: comp(8066..8659)

Top 3 Functional Annotations

Value Algorithm Source
transcription antitermination protein NusG similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 176.0
  • Bit_score: 213
  • Evalue 6.90e-53
nusG: transcription termination/antiterminat (db=HMMTigr db_id=TIGR00922 from=27 to=197 evalue=3.5e-72 interpro_id=IPR001062 interpro_description=Transcription antitermination protein, NusG GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.50e-72
no description (db=HMMSmart db_id=SM00738 from=24 to=133 evalue=4.6e-42 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: positive regulation of RNA elongation from RNA polymerase II promoter (GO:0032968)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.60e-42

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Taxonomy

GWC2_OD1_ACD81_39_22 → Wolfebacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGACTGAAACATCATCACATCAAACTCCAGAAAAAAAGGCTGAAAAGAAGGAGCTTTCTCAGAAGGGGGAGCGACACTGGTACGCGGTACACACCTATTCGGGTTATGAGGATGCCGTTGCGCGTTACTTGAAACAGCGTGTTGATTCCTTGGAAATGGACGATAAGATATTCAACGTCGTCGTTCCAAAGGAAAAAAGCATTAAGATAAAAAACGGAAAGCGAAAGGAGTCTGAAGAAAAAATATATCCTGGTTATGTACTTGTTGATATGGTCATGAGTGAAGACTCATGGTATGTTGTCCGCAATACACCACGCGTTACCGGTTTCGTTGGATCTGATTCTACTGAGCCAACACCATTGTCAAAAGAAGAAGTAGATTTCCTCATTGCTCGCATGGAGGGCGGTGAAAAGAAAATTAAATTGGATTATGTGGTAGGAGAATCGGTAAAGATTTCAGATGGTCCATTTAAAGATTACGAAGGAAAGATAAGTGAAATTGATCAAGAACACGCAAAAATAAAGGTGCTTGTACCGATCTTCGGACGAGAAACTGCTGTCGAGCTTGATTCCTTGCAGTTGCAAAAAATATAA
PROTEIN sequence
Length: 198
MTETSSHQTPEKKAEKKELSQKGERHWYAVHTYSGYEDAVARYLKQRVDSLEMDDKIFNVVVPKEKSIKIKNGKRKESEEKIYPGYVLVDMVMSEDSWYVVRNTPRVTGFVGSDSTEPTPLSKEEVDFLIARMEGGEKKIKLDYVVGESVKISDGPFKDYEGKISEIDQEHAKIKVLVPIFGRETAVELDSLQLQKI*