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ACD81_20

Alias: ACD81_1522.8938.55

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD81_20_1

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comp(3..419)
-----------------
DNA (417bp)
protein (139aa)
cell shape determining protein, MreB/Mrl family
MreB_Mbl (db=HMMPfam db_id=PF06723 from=4 to=139 evalue=4.0e-53 interpro_id=IPR004753 interpro_description=Cell shape determining protein MreB/Mrl GO=Biological Process: cell morphogenesis (GO:0000902))
no description (db=Gene3D db_id=G3DSA:3.30.420.40 from=1 to=139 evalue=7.7e-48)
Actin-like ATPase domain (db=superfamily db_id=SSF53067 from=1 to=139 evalue=3.6e-37)
ACD81_20_2
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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comp(441..1739)
-----------------
DNA (1299bp)
protein (433aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Frankia sp. EuI1c RepID=D1VB19_9ACTO (db=UNIREF evalue=7.0e-109 bit_score=397.0 identity=51.63 coverage=91.4549653579677)
seg (db=Seg db_id=seg from=399 to=416)
ACD81_20_3
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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1859..3211
-----------------
DNA (1353bp)
protein (451aa)
seg (db=Seg db_id=seg from=288 to=309)
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=54)
WD40 repeat-like (db=superfamily db_id=SSF50978 from=275 to=449 evalue=1.2e-08 interpro_id=IPR011046 interpro_description=WD40 repeat-like-containing domain)
Uncharacterized protein {ECO:0000313|EMBL:KKT43683.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_20_4
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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3226..4485
-----------------
DNA (1260bp)
protein (420aa)
L,D-transpeptidase catalytic domain-like (db=superfamily db_id=SSF141523 from=83 to=203 evalue=2.3e-16)
Peptidase_M23 (db=HMMPfam db_id=PF01551 from=253 to=369 evalue=2.6e-15 interpro_id=IPR016047 interpro_description=Peptidase M23)
Duplicated hybrid motif (db=superfamily db_id=SSF51261 from=202 to=377 evalue=1.8e-14 interpro_id=IPR011055 interpro_description=Duplicated hybrid motif)
YkuD (db=HMMPfam db_id=PF03734 from=89 to=202 evalue=4.4e-11 interpro_id=IPR005490 interpro_description=YkuD domain)
ACD81_20_5
GWC2_OD1_ACD81_39_22, Wolfebacteria, Parcubacteria, Bacteria

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4495..5238
-----------------
DNA (744bp)
protein (248aa)
chromosome segregation and condensation protein ScpA
seg (db=Seg db_id=seg from=213 to=224)
seg (db=Seg db_id=seg from=179 to=193)
seg (db=Seg db_id=seg from=87 to=99)
ACD81_20_6
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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comp(5845..6306)
-----------------
DNA (462bp)
protein (154aa)
coiled-coil (db=Coil db_id=coil from=68 to=93 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:KKT43679.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_20_7
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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comp(6342..6821)
-----------------
DNA (480bp)
protein (160aa)
adenylate cyclase n=1 Tax=Streptomyces sp. C RepID=UPI0001B5769E (db=UNIREF evalue=1.0e-14 bit_score=82.0 identity=36.43 coverage=84.375)
adenylate cyclase
coiled-coil (db=Coil db_id=coil from=58 to=79 evalue=NA)
CYTH-like phosphatases (db=superfamily db_id=SSF55154 from=1 to=151 evalue=4.7e-13 interpro_id=IPR004206 interpro_description=mRNA capping enzyme, beta subunit GO=Molecular Function: polynucleotide 5'-phosphatase activity (GO:0004651), Molecular Function: protein binding (GO:0005515), Biological Process: mRNA capping (GO:0006370), Cellular Component: mRNA cap methyltransferase complex (GO:0031533))
ACD81_20_8
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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comp(6833..7564)
-----------------
DNA (732bp)
protein (244aa)
3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100)
ADH_SHORT (db=PatternScan db_id=PS00061 from=148 to=176 evalue=0.0 interpro_id=IPR020904 interpro_description=Short-chain dehydrogenase/reductase, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491))
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=223 evalue=3.2e-60)
SHORT-CHAIN DEHYDROGENASES/REDUCTASE FAMILY MEMBER (db=HMMPanther db_id=PTHR19410 from=1 to=202 evalue=4.2e-59 interpro_id=IPR002198 interpro_description=Short-chain dehydrogenase/reductase SDR GO=Biological Process: metabolic process (GO:0008152), Molecular Function: oxidoreductase activity (GO:0016491))
ACD81_20_9
GWC2_OD1_ACD81_39_22, Wolfebacteria, Parcubacteria, Bacteria

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comp(7619..8044)
-----------------
DNA (426bp)
protein (142aa)
rplK; 50S ribosomal protein L11
coiled-coil (db=Coil db_id=coil from=106 to=127 evalue=NA)
seg (db=Seg db_id=seg from=14 to=29)
L11_bact: ribosomal protein L11 (db=HMMTigr db_id=TIGR01632 from=3 to=141 evalue=5.8e-84 interpro_id=IPR006519 interpro_description=Ribosomal protein L11, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD81_20_10
GWC2_OD1_ACD81_39_22, Wolfebacteria, Parcubacteria, Bacteria

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comp(8066..8659)
-----------------
DNA (594bp)
protein (198aa)
transcription antitermination protein NusG
nusG: transcription termination/antiterminat (db=HMMTigr db_id=TIGR00922 from=27 to=197 evalue=3.5e-72 interpro_id=IPR001062 interpro_description=Transcription antitermination protein, NusG GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=HMMSmart db_id=SM00738 from=24 to=133 evalue=4.6e-42 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: positive regulation of RNA elongation from RNA polymerase II promoter (GO:0032968))
no description (db=Gene3D db_id=G3DSA:3.30.70.940 from=24 to=137 evalue=5.3e-37 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: positive regulation of RNA elongation from RNA polymerase II promoter (GO:0032968))
ACD81_20_11
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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comp(8715..8900)
-----------------
DNA (186bp)
protein (62aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
SECE_SEC61G (db=PatternScan db_id=PS01067 from=8 to=36 evalue=0.0 interpro_id=IPR001901 interpro_description=Protein secE/sec61-gamma protein GO=Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886), Cellular Component: membrane (GO:0016020))
SecE (db=HMMPfam db_id=PF00584 from=5 to=56 evalue=3.7e-19 interpro_id=IPR001901 interpro_description=Protein secE/sec61-gamma protein GO=Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886), Cellular Component: membrane (GO:0016020))
secE_bact: preprotein translocase, SecE sub (db=HMMTigr db_id=TIGR00964 from=5 to=61 evalue=1.1e-13 interpro_id=IPR005807 interpro_description=SecE subunit of protein translocation complex GO=Biological Process: protein secretion (GO:0009306), Molecular Function: P-P-bond-hydrolysis-driven protein transmembrane transporter activity (GO:0015450), Cellular Component: integral to membrane (GO:0016021))
ACD81_20_12

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8913..9002
-----------------
DNA (90bp)
protein (30aa)
8913..9002 + (rbs_motif=ATAA rbs_spacer=10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD24383.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 12 items

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