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anamox1_Sphingobacteriales_43_8_curated

anamox1_Sphingobacteriales_43_1
In projects: anamox1  |  LAC_year1  |  LAC_reactor_startup  |  anammox_full

Consensus taxonomy: Sphingobacteriales  →  Sphingobacteriia  →  Bacteroidetes  →  Bacteria

Displaying items 1-50 of 130 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
anamox1_curated_scaffold_11591
Phylum: Bacteroidetes (66.67%)
3 3683 bp 43.58 1.00 53.76
anamox1_curated_scaffold_5859
Domain: Bacteria (85.71%)
7 10887 bp 41.08 1.00 64.56
anamox1_curated_scaffold_4357
Order: Sphingobacteriales (60%)
5 8161 bp 42.36 1.00 64.81
anamox1_curated_scaffold_1184
Order: Sphingobacteriales (72.22%)
18 23205 bp 43.17 1.00 66.94
anamox1_curated_scaffold_2559
Order: Sphingobacteriales (80%)
15 18123 bp 44.29 1.00 70.19
anamox1_curated_scaffold_4037
Order: Sphingobacteriales (50%)
8 8816 bp 41.31 1.00 70.61
anamox1_curated_scaffold_6003
Domain: Bacteria (60%)
5 6264 bp 41.60 1.00 71.60
anamox1_curated_scaffold_4422
Order: Sphingobacteriales (60%)
5 8022 bp 44.33 1.00 76.33
anamox1_curated_scaffold_12424
Genus: Flavihumibacter (75%)
4 3522 bp 43.67 1.00 79.13
anamox1_curated_scaffold_13111
Species: Flavihumibacter solisilvae (50%)
4 3298 bp 42.30 1.00 79.87
anamox1_curated_scaffold_2670
Genus: Flavihumibacter (55.56%)
9 11925 bp 42.16 1.00 79.92
anamox1_curated_scaffold_14954
Domain: Bacteria (66.67%)
3 3240 bp 40.86 1.00 80.74
anamox1_curated_scaffold_4727
Order: Sphingobacteriales (50%)
4 8083 bp 40.78 1.00 80.91
anamox1_curated_scaffold_2237
Order: Sphingobacteriales (73.91%)
23 29521 bp 42.23 1.00 81.47
anamox1_curated_scaffold_1339
Order: Sphingobacteriales (51.22%)
41 48827 bp 42.48 1.00 81.56
anamox1_curated_scaffold_505
Phylum: Bacteroidetes (77.14%)
70 70861 bp 42.20 1.00 82.26
anamox1_curated_scaffold_1070
Phylum: Bacteroidetes (72.41%)
29 30587 bp 41.34 1.00 83.41
anamox1_curated_scaffold_1673
Order: Sphingobacteriales (56.67%)
30 35897 bp 42.57 1.00 84.61
anamox1_curated_scaffold_4519
Genus: Flavihumibacter (66.67%)
9 8235 bp 41.51 1.00 84.70
anamox1_curated_scaffold_659
Phylum: Bacteroidetes (63.41%)
41 42313 bp 41.06 1.00 84.88
anamox1_curated_scaffold_7459
Phylum: Bacteroidetes (66.67%)
6 5477 bp 41.12 1.00 84.99
anamox1_curated_scaffold_4020
Order: Sphingobacteriales (75%)
8 8620 bp 42.77 1.00 85.34
anamox1_curated_scaffold_649
Phylum: Bacteroidetes (58.33%)
24 37327 bp 43.33 1.00 85.43
anamox1_curated_scaffold_1181
Order: Sphingobacteriales (65.22%)
23 29021 bp 42.29 1.00 85.57
anamox1_curated_scaffold_2989
Order: Sphingobacteriales (50%)
14 11953 bp 42.55 1.00 85.61
anamox1_curated_scaffold_1546
Order: Sphingobacteriales (56.25%)
32 31564 bp 42.78 1.00 85.68
anamox1_curated_scaffold_2009
Phylum: Bacteroidetes (54.55%)
11 18655 bp 40.71 1.00 85.70
anamox1_curated_scaffold_3357
Order: Sphingobacteriales (50%)
8 10047 bp 43.80 1.00 85.82
anamox1_curated_scaffold_748
Phylum: Bacteroidetes (70.27%)
37 33341 bp 42.08 1.00 85.89
anamox1_curated_scaffold_5601
Order: Sphingobacteriales (66.67%)
3 6779 bp 43.55 1.00 85.94
anamox1_curated_scaffold_1635
Phylum: Bacteroidetes (82.86%)
35 35062 bp 41.71 1.00 86.18
anamox1_curated_scaffold_487
Phylum: Bacteroidetes (76.92%)
78 76559 bp 41.94 1.00 86.66
anamox1_curated_scaffold_1569
Order: Sphingobacteriales (62.5%)
16 18627 bp 44.05 1.00 86.84
anamox1_curated_scaffold_3222
Order: Cytophagales (50%)
6 10342 bp 43.58 1.00 87.28
anamox1_curated_scaffold_3782
Order: Sphingobacteriales (57.14%)
7 9354 bp 43.14 1.00 87.31
anamox1_curated_scaffold_735
Order: Sphingobacteriales (68.42%)
38 39859 bp 43.29 1.00 87.46
anamox1_curated_scaffold_557
Order: Sphingobacteriales (65.12%)
43 41248 bp 43.66 1.00 87.50
anamox1_curated_scaffold_2664
Order: Sphingobacteriales (72.22%)
18 12096 bp 42.30 1.00 87.52
anamox1_curated_scaffold_9898
Order: Sphingobacteriales (50%)
4 4211 bp 43.03 1.00 87.56
anamox1_curated_scaffold_6144
Order: Sphingobacteriales (56.25%)
16 18397 bp 43.31 1.00 87.69
anamox1_curated_scaffold_3580
Genus: Flavihumibacter (50%)
22 22314 bp 43.85 1.00 87.74
anamox1_curated_scaffold_2847
Order: Sphingobacteriales (73.68%)
19 20370 bp 43.78 1.00 87.76
anamox1_curated_scaffold_2391
Phylum: Bacteroidetes (55.56%)
9 13227 bp 44.95 1.00 88.09
anamox1_curated_scaffold_16088
Phylum: Bacteroidetes (75%)
4 2877 bp 42.13 1.00 88.63
anamox1_curated_scaffold_110
Order: Sphingobacteriales (62.96%)
108 114310 bp 42.25 1.00 88.67
anamox1_curated_scaffold_834
Order: Sphingobacteriales (57.14%)
35 37842 bp 43.38 1.00 88.67
anamox1_curated_scaffold_3606
Phylum: Bacteroidetes (83.33%)
6 9497 bp 42.27 1.00 88.76
anamox1_curated_scaffold_462
Phylum: Bacteroidetes (82.05%)
39 47026 bp 43.90 1.00 88.80
anamox1_curated_scaffold_3220
Order: Sphingobacteriales (66.67%)
6 10368 bp 45.06 1.00 88.86
anamox1_curated_scaffold_2690
Species: Niastella koreensis (60%)
15 17197 bp 42.91 1.00 88.93
Displaying items 1-50 of 130 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.