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ACD28_25

Alias: ACD28_20444.84273.13

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Displaying items 61-77 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_25_61

Not on your lists

comp(62906..64726)
DNA (1821bp) protein (607aa)
seg (db=Seg db_id=seg from=236 to=249)
seg (db=Seg db_id=seg from=4 to=23)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
DUF3352 (db=HMMPfam db_id=PF11832 from=83 to=281 evalue=7.6e-07 interpro_id=IPR021787 interpro_description=Protein of unknown function DUF3352)
ACD28_25_62
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(64777..64974)
DNA (198bp) protein (66aa)
64777..64974 - (rbs_motif=TAA rbs_spacer=10bp)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_25_63

Not on your lists

comp(65891..66517)
DNA (627bp) protein (209aa)
peptidase M50
transmembrane_regions (db=TMHMM db_id=tmhmm from=178 to=200)
transmembrane_regions (db=TMHMM db_id=tmhmm from=115 to=137)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
ACD28_25_64

Not on your lists

66680..68593
DNA (1914bp) protein (638aa)
slpA; S-layer protein
S-layer glycoprotein protein, contains three N-terminal SLH domains n=2 Tax=Bacillus RepID=D3FZN5_BACPE (db=UNIREF evalue=7.0e-19 bit_score=99.8 identity=34.55 coverage=31.3479623824451)
SLH (db=HMMPfam db_id=PF00395 from=435 to=477 evalue=1.4e-12 interpro_id=IPR001119 interpro_description=S-layer homology domain)
SLH (db=HMMPfam db_id=PF00395 from=499 to=538 evalue=8.4e-06 interpro_id=IPR001119 interpro_description=S-layer homology domain)
ACD28_25_65
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

68687..69133
DNA (447bp) protein (149aa)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=21 evalue=6.0)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_25_66

Not on your lists

comp(69272..72628)
DNA (3357bp) protein (1119aa)
CHRD domain-containing protein
CHRD domain containing protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MI62_RHOM4 (db=UNIREF evalue=2.0e-26 bit_score=125.0 identity=36.1 coverage=20.2859696157283)
seg (db=Seg db_id=seg from=871 to=884)
seg (db=Seg db_id=seg from=725 to=738)
ACD28_25_67

Not on your lists

73526..74119
DNA (594bp) protein (198aa)
ureJ; urease accessory UreJ transmembrane protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=177 to=196)
transmembrane_regions (db=TMHMM db_id=tmhmm from=148 to=170)
transmembrane_regions (db=TMHMM db_id=tmhmm from=116 to=138)
ACD28_25_68
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

74217..75461
DNA (1245bp) protein (415aa)
hypothetical protein
hypothetical protein
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=17 to=150 evalue=9.0e-20)
cni:Calni_1141 hypothetical protein; K07133 alias=ACD28_C00025G00068,ACD28_20444.84273.13G0068,ACD28_20444.84273.13_68 id=31007 tax=ACD28 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=PER organism_desc=PER
ACD28_25_69

Not on your lists

75513..76544
DNA (1032bp) protein (344aa)
TAT_signal_seq: Tat (twin-arginine tra (db=HMMTigr db_id=TIGR01409 from=6 to=38 evalue=0.076 interpro_id=IPR006311 interpro_description=Twin-arginine translocation pathway, signal sequence)
TAT (db=ProfileScan db_id=PS51318 from=1 to=39 evalue=8.164 interpro_id=IPR006311 interpro_description=Twin-arginine translocation pathway, signal sequence)
Uncharacterized protein {ECO:0000313|EMBL:EKD93577.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_25_70

Not on your lists

comp(76565..76801)
DNA (237bp) protein (79aa)
76565..76801 - (rbs_motif=TAA rbs_spacer=7bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD93578.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_25_71
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(77105..77215)
DNA (111bp) protein (37aa)
77105..77215 - (rbs_motif=TAA rbs_spacer=10bp)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_25_72
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(77226..77864)
DNA (639bp) protein (213aa)
77226..77864 - (rbs_motif=TAA rbs_spacer=12bp)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_25_73
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

78143..78880
DNA (738bp) protein (246aa)
transcriptional regulator TrmB
Transcriptional regulator TrmB n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GV83_9EURY (db=UNIREF evalue=5.0e-14 bit_score=81.6 identity=25.0 coverage=95.1219512195122)
TrmB (db=HMMPfam db_id=PF01978 from=6 to=73 evalue=2.1e-17 interpro_id=IPR002831 interpro_description=Transcription regulator TrmB, N-terminal)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=4 to=91 evalue=3.0e-08)
ACD28_25_74
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

79280..80347
DNA (1068bp) protein (356aa)
79280..80347 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_25_75
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(80518..83112)
DNA (2595bp) protein (865aa)
seg (db=Seg db_id=seg from=799 to=813)
seg (db=Seg db_id=seg from=287 to=292)
seg (db=Seg db_id=seg from=22 to=39)
coiled-coil (db=Coil db_id=coil from=98 to=119 evalue=NA)
ACD28_25_76
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(83121..83447)
DNA (327bp) protein (109aa)
coiled-coil (db=Coil db_id=coil from=35 to=63 evalue=NA)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_25_77
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

83574..84107
DNA (534bp) protein (178aa)
PRC-barrel domain (db=superfamily db_id=SSF50346 from=81 to=156 evalue=2.3e-09 interpro_id=IPR011033 interpro_description=PRC-barrel-like)
PRC (db=HMMPfam db_id=PF05239 from=86 to=152 evalue=4.1e-09 interpro_id=IPR007903 interpro_description=PRC-barrel)
PRC-barrel domain (db=superfamily db_id=SSF50346 from=1 to=40 evalue=0.011 interpro_id=IPR011033 interpro_description=PRC-barrel-like)
hypothetical protein Tax=GWA2_PER_44_7
Displaying items 61-77 of 77 in total

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