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ACD28_121

Alias: ACD28_83822.12937.11

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_121_1
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

707..970
DNA (264bp) protein (88aa)
707..970 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_121_2

Not on your lists

comp(1199..1861)
DNA (663bp) protein (221aa)
seg (db=Seg db_id=seg from=170 to=181)
seg (db=Seg db_id=seg from=146 to=158)
seg (db=Seg db_id=seg from=112 to=132)
transmembrane_regions (db=TMHMM db_id=tmhmm from=166 to=183)
ACD28_121_3
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

2474..3118
DNA (645bp) protein (215aa)
Holliday junction ATP-dependent DNA helicase ruvB n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HT76_9FIRM (db=UNIREF evalue=6.0e-69 bit_score=263.0 identity=56.87 coverage=97.6744186046512)
Holliday junction DNA helicase subunit RuvB
HOLLIDAY JUNCTION DNA HELICASE RUVB (db=HMMPanther db_id=PTHR13779:SF2 from=1 to=214 evalue=5.0e-98)
HOLLIDAY JUNCTION DNA HELICASE RUVB-RELATED (db=HMMPanther db_id=PTHR13779 from=1 to=214 evalue=5.0e-98)
ACD28_121_4
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

3131..4639
DNA (1509bp) protein (503aa)
seg (db=Seg db_id=seg from=10 to=27)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=25 evalue=6.0)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_121_5
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

4839..7412
DNA (2574bp) protein (858aa)
ATPases with chaperone activity, ATP-binding subunit
ATPases with chaperone activity, ATP-binding subunit
ATPase AAA-2 domain protein n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MLV1_ALKOO (db=UNIREF evalue=0.0 bit_score=790.0 identity=48.64 coverage=93.2400932400932)
coiled-coil (db=Coil db_id=coil from=486 to=507 evalue=NA)
ACD28_121_6

Not on your lists


7576..8733
DNA (1158bp) protein (386aa)
30S ribosomal protein S1
RNA binding S1 domain protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B22D3 (db=UNIREF evalue=9.0e-64 bit_score=248.0 identity=39.77 coverage=89.1191709844559)
seg (db=Seg db_id=seg from=356 to=385)
seg (db=Seg db_id=seg from=191 to=209)
ACD28_121_7
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

8751..9053
DNA (303bp) protein (101aa)
hypothetical protein; K07742 hypothetical protein (db=KEGG evalue=4.0e-10 bit_score=67.0 identity=36.36 coverage=80.1980198019802)
DUF448 (db=HMMPfam db_id=PF04296 from=5 to=87 evalue=2.4e-16 interpro_id=IPR007393 interpro_description=Protein of unknown function DUF448)
YlxR-like (db=superfamily db_id=SSF64376 from=1 to=100 evalue=8.2e-14 interpro_id=IPR007393 interpro_description=Protein of unknown function DUF448)
no description (db=Gene3D db_id=G3DSA:3.30.1230.10 from=3 to=100 evalue=1.1e-10 interpro_id=IPR007393 interpro_description=Protein of unknown function DUF448)
ACD28_121_8
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

9050..12355
DNA (3306bp) protein (1102aa)
hypothetical protein
hypothetical protein
UvrD/REP helicase n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSD5_9BACT (db=UNIREF evalue=2.0e-156 bit_score=557.0 identity=35.81 coverage=81.3067150635209)
seg (db=Seg db_id=seg from=783 to=794)
ACD28_121_9
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

12630..12875
DNA (246bp) protein (82aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=53 to=75)
hypothetical protein Tax=GWA2_PER_44_7
LINKS directly to start ACD28_38979 Jill Banfield (11/15/12)
ACD28_121_10
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

12872..12973
DNA (102bp) protein (34aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
Putative DNA recombination protein Tax=GWA2_PER_44_7
Displaying 10 items

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