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ACD2_24

Alias: ACD2_2507.52297.57

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD2_24_1
ACD2, Gracilibacteria, Bacteria

Not on your lists

111..218
DNA (108bp) protein (36aa)
111..218 + (rbs_motif=TAA rbs_spacer=6bp)
hypothetical protein Tax=ACD2
ACD2_24_2
unknown

Not on your lists

comp(215..1126)
DNA (912bp) protein (304aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JQR4_9RHOB (db=UNIREF evalue=2.0e-14 bit_score=83.2 identity=24.35 coverage=93.75)
NAD-dependent epimerase/dehydratase (db=KEGG evalue=5.0e-14 bit_score=82.0 identity=27.91 coverage=82.2368421052632)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=2 to=300 evalue=1.3e-29)
NAD DEPENDENT EPIMERASE/DEHYDRATASE (db=HMMPanther db_id=PTHR10366 from=14 to=290 evalue=1.9e-23)
ACD2_24_3
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(1117..2667)
DNA (1551bp) protein (517aa)
AMP-dependent synthetase and ligase
transmembrane_regions (db=TMHMM db_id=tmhmm from=71 to=88)
Acetyl-CoA synthetase-like (db=superfamily db_id=SSF56801 from=6 to=516 evalue=9.0e-35)
ATP-DEPENDENT AMP-BINDING ENZYME FAMILY MEMBER (db=HMMPanther db_id=PTHR11968 from=6 to=512 evalue=3.0e-23)
ACD2_24_4
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(2679..3905)
DNA (1227bp) protein (409aa)
hypothetical protein
Glutathione synthetase ATP-binding domain-like (db=superfamily db_id=SSF56059 from=118 to=315 evalue=3.2e-07)
hypothetical protein alias=ACD2_C00024G00004,ACD2_2507.52297.57_4,ACD2_2507.52297.57G0004 id=34871 tax=ACD2 species=Brevibacillus brevis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=BD1-5 organism_desc=BD1-5
hypothetical protein Tax=ACD2
ACD2_24_5
unknown

Not on your lists

comp(3907..5016)
DNA (1110bp) protein (370aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R730_9CHLA (db=UNIREF evalue=4.0e-41 bit_score=172.0 identity=31.44 coverage=95.9459459459459)
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R730_9CHLA Tax=ACD2
ACD2_24_6
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(5029..6033)
DNA (1005bp) protein (335aa)
3-ketoacyl-ACP synthase I (EC:2.3.1.41)
seg (db=Seg db_id=seg from=170 to=181)
Thiolase-like (db=superfamily db_id=SSF53901 from=4 to=188 evalue=1.2e-22 interpro_id=IPR016039 interpro_description=Thiolase-like GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
Thiolase-like (db=superfamily db_id=SSF53901 from=189 to=334 evalue=2.7e-16 interpro_id=IPR016039 interpro_description=Thiolase-like GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
ACD2_24_7
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(6226..6531)
DNA (306bp) protein (102aa)
6226..6531 - (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=ACD2
ACD2_24_8
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(6768..6914)
DNA (147bp) protein (49aa)
seg (db=Seg db_id=seg from=16 to=48)
seg 16..48 Tax=ACD2
ACD2_24_9
unknown

Not on your lists

7221..10130
DNA (2910bp) protein (970aa)
Sensor protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FXE4_9DELT (db=UNIREF evalue=2.0e-49 bit_score=202.0 identity=30.99 coverage=38.1443298969072)
PAS domain S-box
seg (db=Seg db_id=seg from=573 to=591)
coiled-coil (db=Coil db_id=coil from=570 to=591 evalue=NA)
ACD2_24_10
ACD2, Gracilibacteria, Bacteria

Not on your lists

11076..11240
DNA (165bp) protein (55aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=34)
transmembrane_regions 15..34 Tax=ACD2
ACD2_24_11
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(11278..13377)
DNA (2100bp) protein (700aa)
Tex protein-related transcription accessory protein with S1 RNA binding domain
Tex protein-related transcription accessory protein with S1 RNA binding domain
Tex protein-related transcription accessory protein with S1 RNA binding domain
RNA binding S1 domain protein n=1 Tax=bacterium S5 RepID=D3BWV8_9BACT (db=UNIREF evalue=7.0e-99 bit_score=365.0 identity=35.3 coverage=97.5714285714286)
ACD2_24_12
ACD2, Gracilibacteria, Bacteria

Not on your lists

13552..14013
DNA (462bp) protein (154aa)
seg (db=Seg db_id=seg from=140 to=149)
seg 140..149 Tax=ACD2
ACD2_24_13
ACD2, Gracilibacteria, Bacteria

Not on your lists

14029..14226
DNA (198bp) protein (66aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=28)
seg (db=Seg db_id=seg from=18 to=32)
transmembrane_regions 10..28 Tax=ACD2
ACD2_24_14
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(14287..15210)
DNA (924bp) protein (308aa)
IucA_IucC (db=HMMPfam db_id=PF04183 from=45 to=118 evalue=1.4e-07 interpro_id=IPR007310 interpro_description=IucA/IucC GO=Molecular Function: siderophore-iron transmembrane transporter activity (GO:0015343), Biological Process: siderophore biosynthetic process (GO:0019290))
IucA_IucC 45..118 Tax=ACD2
ACD2_24_15
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(15200..15730)
DNA (531bp) protein (177aa)
15200..15730 - (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=ACD2
ACD2_24_16
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(15699..16547)
DNA (849bp) protein (283aa)
radical SAM domain protein (db=KEGG evalue=5.0e-15 bit_score=85.1 identity=27.41 coverage=88.339222614841)
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=6 to=257 evalue=4.9e-27)
Radical_SAM (db=HMMPfam db_id=PF04055 from=10 to=142 evalue=8.1e-11 interpro_id=IPR007197 interpro_description=Radical SAM GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: iron-sulfur cluster binding (GO:0051536))
radical SAM domain protein alias=ACD2_2507.52297.57G0016,ACD2_2507.52297.57_16,ACD2_C00024G00016 id=34857 tax=ACD2 species=Clostridium botulinum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=BD1-5 organism_desc=BD1-5
ACD2_24_17
unknown

Not on your lists


17032..18330
DNA (1299bp) protein (433aa)
Aspartyl-tRNA synthetase n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AIY3_9ACTN (db=UNIREF evalue=8.0e-81 bit_score=304.0 identity=35.67 coverage=99.3071593533487)
aspartyl-tRNA synthetase
seg (db=Seg db_id=seg from=39 to=60)
ASPARTYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR22594:SF6 from=78 to=432 evalue=1.1e-85)
ACD2_24_18
ACD2, Gracilibacteria, Bacteria

Not on your lists

18406..18789
DNA (384bp) protein (128aa)
seg (db=Seg db_id=seg from=40 to=55)
transmembrane_regions (db=TMHMM db_id=tmhmm from=109 to=126)
transmembrane_regions (db=TMHMM db_id=tmhmm from=67 to=89)
transmembrane_regions (db=TMHMM db_id=tmhmm from=35 to=57)
ACD2_24_19
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(18829..23577)
DNA (4749bp) protein (1583aa)
seg (db=Seg db_id=seg from=374 to=392)
seg (db=Seg db_id=seg from=356 to=367)
seg (db=Seg db_id=seg from=328 to=338)
seg (db=Seg db_id=seg from=84 to=99)
ACD2_24_20
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(23674..25425)
DNA (1752bp) protein (584aa)
seg (db=Seg db_id=seg from=516 to=537)
seg 516..537 Tax=ACD2
hypothetical protein
ACD2_24_21
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(25464..26123)
DNA (660bp) protein (220aa)
NUDIX hydrolase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9M8_MAGSM (db=UNIREF evalue=4.0e-10 bit_score=68.2 identity=23.9 coverage=88.6363636363636)
NUDIX hydrolase (db=KEGG evalue=4.0e-10 bit_score=68.2 identity=23.9 coverage=88.6363636363636)
Nudix (db=superfamily db_id=SSF55811 from=1 to=204 evalue=1.9e-06 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
NUDIX (db=ProfileScan db_id=PS51462 from=37 to=199 evalue=9.232)
ACD2_24_22
ACD2, Gracilibacteria, Bacteria

Not on your lists

26411..27295
DNA (885bp) protein (295aa)
coiled-coil (db=Coil db_id=coil from=75 to=107 evalue=NA)
coiled-coil (db=Coil db_id=coil from=160 to=181 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=26 to=48)
ACD2_24_23
ACD2, Gracilibacteria, Bacteria

Not on your lists

28493..28831
DNA (339bp) protein (113aa)
28493..28831 + (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=ACD2
ACD2_24_24
ACD2, Gracilibacteria, Bacteria

Not on your lists

29198..29593
DNA (396bp) protein (132aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
transmembrane_regions 5..24 Tax=ACD2
ACD2_24_25
ACD2, Gracilibacteria, Bacteria

Not on your lists

29689..30006
DNA (318bp) protein (106aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=2 to=19)
transmembrane_regions 5..27 Tax=ACD2
ACD2_24_26
ACD2, Gracilibacteria, Bacteria

Not on your lists

30038..32179
DNA (2142bp) protein (714aa)
RND family efflux transporter MFP subunit (db=KEGG evalue=7.0e-10 bit_score=70.1 identity=26.53 coverage=26.0504201680672)
seg (db=Seg db_id=seg from=263 to=274)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
coiled-coil (db=Coil db_id=coil from=393 to=414 evalue=NA)
ACD2_24_27
ACD2, Gracilibacteria, Bacteria

Not on your lists

32212..35451
DNA (3240bp) protein (1080aa)
CzcA family heavy metal efflux pump
CzcA family heavy metal efflux pump
CzcA family heavy metal efflux pump
Cation efflux system protein, AcrB/AcrD/AcrF family protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6ML00_BDEBA (db=UNIREF evalue=0.0 bit_score=691.0 identity=39.5 coverage=91.9444444444444)
ACD2_24_28
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(35508..37310)
DNA (1803bp) protein (601aa)
Beta-N-acetylhexosaminidase n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1U9_HALOH (db=UNIREF evalue=2.0e-127 bit_score=460.0 identity=42.4 coverage=95.8402662229617)
beta-N-acetylhexosaminidase (EC:3.2.1.52)
beta-N-acetylhexosaminidase (EC:3.2.1.52)
beta-N-acetylhexosaminidase (EC:3.2.1.52)
ACD2_24_29
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(37271..37426)
DNA (156bp) protein (52aa)
37271..37426 - (rbs_motif=TAAAAA rbs_spacer=8bp)
hypothetical protein Tax=ACD2
ACD2_24_30
ACD2, Gracilibacteria, Bacteria

Not on your lists

37453..38094
DNA (642bp) protein (214aa)
peptidase m50
transmembrane_regions (db=TMHMM db_id=tmhmm from=6 to=25)
seg (db=Seg db_id=seg from=139 to=150)
transmembrane_regions (db=TMHMM db_id=tmhmm from=165 to=183)
Displaying items 1-30 of 44 in total

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