Alias: ACD3_1163.15871.59
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD3_20_1
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
1..816
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||
ACD3_20_2
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
1054..4647
|
UPI0001D5B34C related cluster n=1 Tax=unknown RepID=UPI0001D5B34C (db=UNIREF evalue=0.0 bit_score=1053.0 identity=47.1 coverage=89.5659432387312)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
seg (db=Seg db_id=seg from=682 to=695)
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ACD3_20_3
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
4680..8687
|
DNA-directed RNA polymerase subunit beta' n=5 Tax=Dehalococcoides RepID=RPOC_DEHSC (db=UNIREF evalue=0.0 bit_score=1024.0 identity=43.0 coverage=94.0119760479042)
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
coiled-coil (db=Coil db_id=coil from=230 to=251 evalue=NA)
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|
ACD3_20_4
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
10073..10462
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=100 to=122)
seg (db=Seg db_id=seg from=101 to=110)
transmembrane_regions 100..122 Tax=ACD3
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ACD3_20_5
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
comp(10540..12111)
|
seg (db=Seg db_id=seg from=418 to=432)
seg (db=Seg db_id=seg from=13 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
Pili subunits (db=superfamily db_id=SSF54523 from=13 to=44 evalue=4.2e-13)
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ACD3_20_6
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
comp(12192..13829)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=12 to=33)
seg (db=Seg db_id=seg from=3 to=10)
seg (db=Seg db_id=seg from=298 to=310)
|
|
ACD3_20_7
unknown
|
Not on your lists |
comp(13907..14515)
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probable transcriptional regulator n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25B3 (db=UNIREF evalue=3.0e-12 bit_score=75.1 identity=31.22 coverage=89.1625615763547)
coiled-coil (db=Coil db_id=coil from=38 to=59 evalue=NA)
probable transcriptional regulator n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25B3 Tax=ACD3
transcriptional regulator
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ACD3_20_8
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
comp(14575..14712)
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14575..14712 - (rbs_motif=TAA rbs_spacer=7bp)
hypothetical protein Tax=ACD3
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ACD3_20_9
uncultured bacterium (gcode 4), Bacteria
|
Not on your lists |
14809..15492
|
50S ribosomal protein L1
rplA_bact: ribosomal protein L1 (db=HMMTigr db_id=TIGR01169 from=3 to=227 evalue=3.1e-97 interpro_id=IPR005878 interpro_description=Ribosomal protein L1, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
Ribosomal protein, L1p/L1a/L10e/organellar L1 types (db=HMMPIR db_id=PIRSF002155 from=1 to=227 evalue=2.6e-83 interpro_id=IPR002143 interpro_description=Ribosomal protein L1 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396))
50S RIBOSOMAL PROTEIN L1P (db=HMMPanther db_id=PTHR23105:SF5 from=21 to=225 evalue=1.7e-71)
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