name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
MEL_B2_8_31
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(27173..29140)
|
protein of unknown function DUF115
(db=HMMPfam db_id=PF01973 from=200 to=367 evalue=9.5e-37 interpro_id=IPR002826 interpro_description=Protein of unknown function DUF115)
Uncharacterized protein {ECO:0000313|EMBL:CDC21665.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
protein of unknown function DUF115 alias=ACD20_C00024G00006,ACD20_75178.18808.14G0006,ACD20_75178.18808.14_6 id=18381 tax=ACD20 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
|
|
MEL_B2_8_32
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
29318..30097
|
tetratricopeptide domain-containing protein
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=30 to=233 evalue=6.9e-40 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
TPR-like (db=superfamily db_id=SSF48452 from=24 to=233 evalue=8.3e-33)
TETRATRICOPEPTIDE REPEAT PROTEIN, TPR (db=HMMPanther db_id=PTHR23083 from=21 to=230 evalue=3.5e-25)
|
|
MEL_B2_8_33
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(30063..31154)
|
seg (db=Seg db_id=seg from=112 to=119)
Uncharacterized protein {ECO:0000313|EMBL:CDC21667.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_8_34
Brachyspira sp. CAG:484, Melainabacteria, Bacteria
|
Not on your lists |
comp(31159..32187)
|
Ribosomal RNA large subunit methyltransferase N n=10 Tax=Thermoanaerobacter RepID=RLMN_THEP3 (db=UNIREF evalue=0.0 bit_score=305.0 identity=48.1 coverage=97.08454810495627)
Cfr family radical SAM protein
Cfr family radical SAM protein
Predicted radical SAM enzyme, Cfr type (db=HMMPIR db_id=PIRSF006004 from=1 to=341 evalue=8.4e-155 interpro_id=IPR004383 interpro_description=Ribosomal RNA large subunit methyltransferase RlmN; GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: rRNA processing (GO:0006364), Molecular Function: RNA methyltransferase activity (GO:0008173))
|
|
MEL_B2_8_35
Brachyspira sp. CAG:484, Melainabacteria, Bacteria
|
Not on your lists |
32342..33199
|
uridine kinase (EC:2.7.1.48)
seg (db=Seg db_id=seg from=22 to=36)
(db=HMMPfam db_id=PF00485 from=69 to=257 evalue=5.7e-28 interpro_id=IPR006083 interpro_description=Phosphoribulokinase/uridine kinase GO=Molecular Function: ATP binding (GO:0005524), Biological Process: metabolic process (GO:0008152), Molecular Function: kinase activity (GO:0016301))
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=68 to=276 evalue=5.4e-27)
|
|
MEL_B2_8_36
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(33275..33448)
|
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 2 n=1 Tax=Gloeobacter violaceus PCC 7421 RepID=RS212_GLOVI (db=UNIREF evalue=7.8e-19 bit_score=98.0 identity=85.7 coverage=94.82758620689656)
seg (db=Seg db_id=seg from=44 to=56)
RIBOSOMAL_S21 (db=PatternScan db_id=PS01181 from=13 to=25 evalue=0.0 interpro_id=IPR018278 interpro_description=Ribosomal protein S21, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
|
|
MEL_B2_8_37
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
33633..34328
|
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=36 to=183 evalue=6.4e-06 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Uncharacterized protein {ECO:0000313|EMBL:CDC21671.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_8_38
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
34360..35613
|
Collagenase family protease n=5 Tax=Finegoldia magna RepID=B0S112_FINM2 (db=UNIREF evalue=0.0 bit_score=359.0 identity=45.2 coverage=95.21531100478468)
collagenase family protease
collagenase family protease
seg (db=Seg db_id=seg from=341 to=361)
|
|
MEL_B2_8_39
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
35610..36086
|
HAD superfamily hydrolase
YqeG_hyp_ppase: HAD phosphatase, famil (db=HMMTigr db_id=TIGR01668 from=1 to=158 evalue=2.0e-20 interpro_id=IPR010021 interpro_description=HAD-superfamily phosphatase, subfamily IIIA)
HAD-like (db=superfamily db_id=SSF56784 from=5 to=135 evalue=5.9e-18 interpro_id=IPR023214 interpro_description=HAD-like domain)
|
|
MEL_B2_8_40
Clostridium sp. CAG:715, Melainabacteria, Bacteria
|
Not on your lists |
comp(36083..36310)
|
preprotein translocase subunit SecG
seg (db=Seg db_id=seg from=11 to=20)
transmembrane_regions (db=TMHMM db_id=tmhmm from=55 to=74)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
|
|
MEL_B2_8_41
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(36331..36642)
|
hypothetical protein
(db=HMMPfam db_id=PF02594 from=13 to=88 evalue=7.2e-24 interpro_id=IPR003746 interpro_description=Protein of unknown function DUF167)
YggU-like (db=superfamily db_id=SSF69786 from=2 to=91 evalue=1.1e-23 interpro_id=IPR003746 interpro_description=Protein of unknown function DUF167)
no description (db=Gene3D db_id=G3DSA:3.30.1200.10 from=2 to=86 evalue=1.0e-22 interpro_id=IPR003746 interpro_description=Protein of unknown function DUF167)
|
|
MEL_B2_8_42
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
36691..38946
|
(p)ppGpp synthetase I, SpoT/RelA (EC:2.7.6.5)
(p)ppGpp synthetase I, SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA n=1 Tax=Cyanothece sp. PCC 7822 RepID=E0U837_CYAP2 (db=UNIREF evalue=0.0 bit_score=716.0 identity=49.0 coverage=93.88297872340425)
spoT_relA: RelA/SpoT family protein (db=HMMTigr db_id=TIGR00691 from=54 to=732 evalue=1.3e-300 interpro_id=IPR004811 interpro_description=RelA/SpoT protein GO=Biological Process: guanosine tetraphosphate metabolic process (GO:0015969))
|
|
MEL_B2_8_43
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
39262..40023
|
seg (db=Seg db_id=seg from=200 to=213)
Uncharacterized protein {ECO:0000313|EMBL:CDC21681.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_8_44
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
40044..41225
|
folP; dihydropteroate synthase (EC:2.5.1.15)
seg (db=Seg db_id=seg from=270 to=283)
seg (db=Seg db_id=seg from=167 to=176)
DHPS_1 (db=PatternScan db_id=PS00792 from=134 to=149 evalue=0.0 interpro_id=IPR000489 interpro_description=Pterin-binding GO=Biological Process: pteridine-containing compound metabolic process (GO:0042558))
|
|
MEL_B2_8_45
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(41214..41618)
|
(db=HMMPfam db_id=PF03692 from=23 to=102 evalue=4.4e-11 interpro_id=IPR005358 interpro_description=Uncharacterised protein family UPF0153)
Uncharacterized protein {ECO:0000313|EMBL:CDC21683.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
|
|
MEL_B2_8_46
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(41611..42861)
|
TPR repeat domain-containing protein
TPR repeat:Sel1-like repeat:Sel1-like repeat n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4CAF1_CROWT (db=UNIREF evalue=8.6e-11 bit_score=74.0 identity=24.1 coverage=68.34532374100719)
coiled-coil (db=Coil db_id=coil from=170 to=191 evalue=NA)
seg (db=Seg db_id=seg from=279 to=294)
|
|
MEL_B2_8_47
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(42883..43221)
|
42883..43221 - ( gc_cont=0.327)
Uncharacterized protein {ECO:0000313|EMBL:CDC21685.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_8_48
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
43409..44107
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=195 to=214)
transmembrane_regions (db=TMHMM db_id=tmhmm from=163 to=185)
transmembrane_regions (db=TMHMM db_id=tmhmm from=120 to=142)
transmembrane_regions (db=TMHMM db_id=tmhmm from=83 to=105)
|
|
MEL_B2_8_49
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(44104..46098)
|
UvrABC system protein B n=1 Tax=Thermincola potens JR RepID=D5XCB5_THEPJ (db=UNIREF evalue=0.0 bit_score=827.0 identity=62.9 coverage=98.19548872180451)
excinuclease ABC subunit B
excinuclease ABC subunit B
coiled-coil (db=Coil db_id=coil from=263 to=284 evalue=NA)
|
|
MEL_B2_8_50
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
46213..47628
|
UPI00006CD5C0 related cluster n=1 Tax=unknown RepID=UPI00006CD5C0 (db=UNIREF evalue=2.7e-16 bit_score=92.0 identity=19.8 coverage=90.88983050847457)
anaphase-promoting complex, cyclosome, subunit 3
coiled-coil (db=Coil db_id=coil from=99 to=120 evalue=NA)
TPR-like (db=superfamily db_id=SSF48452 from=8 to=439 evalue=3.2e-21)
|
|
MEL_B2_8_51
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
47872..48279
|
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
Uncharacterized protein {ECO:0000313|EMBL:CDC17944.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein alias=MEL_C1_C00001G01558 id=161190 tax=MEL_C1 species=Colwellia psychrerythraea genus=Colwellia taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria
|
|
MEL_B2_8_52
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
48402..48941
|
coiled-coil (db=Coil db_id=coil from=128 to=174 evalue=NA)
seg (db=Seg db_id=seg from=38 to=47)
seg (db=Seg db_id=seg from=66 to=81)
Uncharacterized protein {ECO:0000313|EMBL:CDC17945.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_8_53
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(49010..50239)
|
ATPase AAA
ATPase AAA
AAA ATPase central domain protein n=2 Tax=Thermoanaerobacterium RepID=D9TPT6_THETC (db=UNIREF evalue=0.0 bit_score=387.0 identity=48.1 coverage=99.26829268292683)
HOLLIDAY JUNCTION DNA HELICASE RUVB-RELATED (db=HMMPanther db_id=PTHR13779 from=24 to=409 evalue=4.8e-163)
|
|
MEL_B2_8_54
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
50313..50921
|
seg (db=Seg db_id=seg from=4 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
Uncharacterized protein {ECO:0000313|EMBL:CDC17947.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_8_55
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
51015..51845
|
51015..51845 + ( gc_cont=0.387)
Uncharacterized protein {ECO:0000313|EMBL:CDC17948.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_8_56
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
51897..52397
|
||
MEL_B2_8_57
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
52573..55332
|
coiled-coil (db=Coil db_id=coil from=615 to=650 evalue=NA)
seg (db=Seg db_id=seg from=247 to=258)
seg (db=Seg db_id=seg from=456 to=471)
seg (db=Seg db_id=seg from=754 to=767)
|
|
MEL_B2_8_58
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(55388..55711)
|
Thioredoxin n=2 Tax=Microcystis aeruginosa RepID=A8YED3_MICAE (db=UNIREF evalue=3.7e-30 bit_score=136.0 identity=52.3 coverage=98.14814814814815)
thioredoxin
THIOREDOXIN_1 (db=PatternScan db_id=PS00194 from=24 to=42 evalue=0.0 interpro_id=IPR017937 interpro_description=Thioredoxin, conserved site GO=Biological Process: cell redox homeostasis (GO:0045454))
thioredoxin: thioredoxin (db=HMMTigr db_id=TIGR01068 from=7 to=107 evalue=6.2e-53 interpro_id=IPR005746 interpro_description=Thioredoxin GO=Biological Process: glycerol ether metabolic process (GO:0006662), Molecular Function: electron carrier activity (GO:0009055), Molecular Function: protein disulfide oxidoreductase activity (GO:0015035), Biological Process: cell redox homeostasis (GO:0045454))
|
|
MEL_B2_8_59
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
56036..56911
|
Arginase n=4 Tax=Bacteroides RepID=C3RAP6_9BACE (db=UNIREF evalue=0.0 bit_score=383.0 identity=60.5 coverage=98.97260273972603)
arginase
arginase
Arginase/deacetylase (db=superfamily db_id=SSF52768 from=6 to=290 evalue=1.3e-35)
|
|
MEL_B2_8_60
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
56989..58011
|
rfaF; lipopolysaccharide heptosyltransferase II
seg (db=Seg db_id=seg from=314 to=325)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=7 to=340 evalue=2.3e-37)
no description (db=Gene3D db_id=G3DSA:3.40.50.2000 from=170 to=337 evalue=5.5e-13)
|