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scnpilot_p_inoc_scaffold_44_275

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(312743..316432)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=767434 species="Bacteria; Proteobacteria; Gam similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 999.99
  • Bit_score: 1061
  • Evalue 0.0
Ribonuclease E n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L0U5_FRAAD similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 999.99
  • Bit_score: 1061
  • Evalue 0.0
  • rbh
ribonuclease, Rne/Rng family similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 999.99
  • Bit_score: 1061
  • Evalue 0.0

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Taxonomy

Frateuria aurantia → Frateuria → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3690
ATGAAACGTATGTTGATCAACGCGACTCAGCGTGAGGAGTTGCGTGTGGCCATCGTGGACGGCCAGAACCTGTTCGACCTCGACATCGAGATCCCCTCCAAGGAACAGAAGAAGGCCAACATCTACAAGGGCCGCATCACCCGTGTGGAACCCTCGCTCGAAGCCTGCTTCGTCGAATATGGCGGCGAGCGCCACGGCTTCCTGCCGCTGAAGGAAATCTCGCGCGACTTCTTCGCCTCGGGCGTGGACCACAACCGCGCCGGCATCCGCGAGCTGATCAAGGAAGGCCAGGAAATCGTCGTCCAGGTCGAGAAGGAAGAGCGCGGCAACAAGGGCGCCGCGCTGACCACCTTCATCTCGCTGGCCGGCCGCTACATGGTGCTGATGCCGAACAACCCGCGTGCGGGCGGCGTGTCGCGCCGCATCGAGGGCGAGGACCGGGCCAACCTCAAGGAGGTCATGGACCACCTGAACTGCCCCGACGACATGGGCCTGATCATCCGCACGGCCGGCATGGGCCGCGACGCCGAAGAGCTGCAGTGGGATCTCGACTACCTGCTGCAGCTGTGGAAGGCGATCTCCGAAGCGGCCACCTCGCGCCCGGGTCCGTTCCTGATCTACCAGGAATCCAAGCTCATCATCCGCGCGCTGCGCGACTACCTGCGCAACGACGTCGGCGAAATCCTCATCGACAACGAGGAGCTGTACCACGACGCGCGCGACTTCGTGCAGCAGGTCATGCCGAACAACCTGCGCAAGCTCAAGCTGTACAAGGACACCACGCCGCTGTTCTCGCGCTTCCAGATCGAGACCCAGATCGAGAACGCGTTCGAGCGCACCGTGCGCCTGCCGTCGGGCGGCTCCATCGTCATCGACCAGACCGAAGCGCTGACCGCGATCGACATCAACTCGGCCAAGGCGACCAAGGGCGGCGACATCGAGGAAACCGCGTTCAACACCAATCGCGAGGCGGCAATCGAGATCGCGCGCCAGCTGCGCATCCGCGACGCGGGCGGCCTGATCGTCATCGACTTCATCGACATGGACAGCCCGCGCCACCAGCGCGAGGTCGAAGAGACGCTGAAGGATGCGCTGAAGCTCGACCGCGCGCGCGTGCAGCTCGGCCGCATCTCGCGCTTCGGCCTCATGGAAATGTCGCGCCAGCGCCTGCGCCCGAGCCTCGGCGAGTCGACCCAGATCGTCTGCCCGCGCTGCACCGGCCACGGCCGCATCCGCAGCATCGAGTCGCTGTCGCTGTCGGCCCTGCGCCTGGTCGAAGAGCACGCGATGAAGGACAACACCGGCCAGGTGCTGGTGCAGGCGCCGTCCTCGGTCGCCAACTTCCTGCTCAATGAAAAGCGCCGCCAGGTCAGCGAGATCGAACAGCGTCACGACGTCGCCGTCATCATCGTCGCCGACGAGAAGCTGGAAACGCCGCACCTGGAAATCCAGCGCATCAAGAGCGCCGACATGGGCGACAGCCCGCGCCCGAGCTACGACCGCCTGACCCCGATCGTGGTCACGCCGCCGCCGCAGGTCGCCCAGCCCAGCGCCGAACCGGAACGTCCGGCGGTCAGCCGCGTCGTGCCGGCCAGCCCGGCGCCGCTGCGTCCGGACGAGGACGAAGCCCCCGTCGCTGCGCCCGCTCCGGCCGCCGCGCCCGCCGCCGCGCGCTCGGCGCCGAGCCCGGGCTTCTGGTCGCGCGTGATGGCGTTCTTCAAGGGCGAACCCGAGGCGCCGGCTGCGCCGGTCGCCGCTGCCGCGCCGGCCAAGCCCGCGCGTCCGGCCTCGCCGGCGCGCAACGAGCGCGACGCGCGCCGCGGCGGCCGCGACCGCGACGGCCGTGACCGTGACGGCCGCGATCGCGGCGCCCGCGGCGACGCCCAGCGCGGCGGCCGCGACGGTGCCAAGCCGCAGCGTGCCGAGCAGCCCCAGGCCAAGCCGGCCCAGGGCGGTCAGGCCCAGCAGCGCCAGGACAAGGACAAGGACAAGGAACCGCGTCAGCCCCAGGGCGGCGCGCAGCAGCAGGCCCGTCCGGAACGTCAGGACAAGCCGGAACGCCAGGACAAGCGCCAGGGCGACAACCGTGGCCCGCGTCCGCAGGACGGCCGCGGCGAAGCCGCCAAGGCCGACGCGCGCGACAACGCCGCGCCCAAGCCCGCCGCCGAACCGCGCACGGCCGAACCGCGCCAGCCCGAGGCGCGCAGCGAAGCCCGCGCAGCAGCAACGGCCGGTGCCGACGCGAAGGCTGCGGAAGCGAACAAGCCGGTGATCGCAGCACCGCTCGCCGAGGACGCAGTCGCTGCCGCCCCCCTCGCCGCGGCAGCGCCGGGCGAAGTCGCACCGGGCATCGCTGCCGACGACAGCGGCCGTGAAGGCGGCCGCCGCCGCCGCGGCCGTCGCGGCGGCCGCCGCCGCCGTCGCAACGAAGCCGGCCAGGCCGGCGCCGCCGGCGATGAGGACGGCGACTTCGACGACGAAGACGGCGACACCGCAGCCGACGCGGCCGCAGCCAGGCCGGCCAATGACGACACGAGCCCGCGTCCGGCCGCCGCTCCGCGCGCGGCCGCGCCGCGCGACGGCGTGACGCCGCCCGCTACCGGCGATGCCGGCGCGACGACGGCGGCGACCAGCGCCGCGCCGATCGCCTCGGCGCCCGCTTCGCCGGCAGAGGCGAAGCCGGAAGCGGCCGCGCGACCGGCTGCCGTGGCTTCGGTTCCGGCTCCGCTGGCTTCGTCGCCGGCTGCTCCGGCTGCCGCGGCGCCCGCACCGGCTGTTCCGACTCCGACTCCGACTCCGACTCCGGCTGCCCCAGCTCCGGAGGCCTCCGCTGCGGCTGCCTCGACACCTGTTGCTCCGACGGCCTCGGCTCCGGTTCCGGCAGCTCCGGCCGCGGCAGCTTCGACTCCGACGACGCCTGCGACGACGGCACCGACCGCTTCGACGCCGGCAGCGCCGGCTCCGGCGGTTGCGGCGGCGACTCCGACGGCCTCGGCCCCGCCAGCTTCGGCGCCTGTGGCTCCGGCTCAGGCCGCTCCGCCGGCGCCGGCGGCTTCTGCGCCGGCAGCTCCGACGACACCGGCTGCGGCCGTCCCGGCTCCGGCTCCCGAGACTCGGGCTGCAACCACCCCGGCCCCGGCTGCTCCGGCCTCGGCGCCGGCGAATCCGGCTCCGCTGGCCTCGGCCCCGGTCCGTACCGCGCCGATCCCGGCAACGCCGGCCAGCGCGGTGGTCACCCCTCCGCCGGCACCGGTCGTGCCGCCGCGCGTTGCGCCCGCCAAGCCGGTCGTGGATTCGTCCGTGCCGGCGCCGCCGCGTTCGGCGCCGATCCCGGTTTCGGCCGCTCCGGCAGAGCCCAAGCCGATGCCGGTGCCGCCGGCGCCGGCCGCCACGCCCGCGCCGCAACCGGCTCCGGTGAAGCTGGCCGTCCCGACGGCCGTCGCCTCGGCACCGATTGCCGGTGCCGCGCGTCCGGCCGCCCCCGAAGCGGCCAAGCCGGCCGCCCAGCTGTCGCTGGGCATGCCCGAGCCGCAGCCCGAGCTGCCGGCCGGCACCAGCGTGCGCCAGGCCGTATCCTCGGCGCTGCGCGCGCCGCCGGCCGCACGCCCCGTGACGCCGGCGGCCAAGGCCGACGCGAAGCCGGCGGAAAGCGACGACAAGCCGACCGAAGGCGACGACAAGAGCGCCTGA
PROTEIN sequence
Length: 1230
MKRMLINATQREELRVAIVDGQNLFDLDIEIPSKEQKKANIYKGRITRVEPSLEACFVEYGGERHGFLPLKEISRDFFASGVDHNRAGIRELIKEGQEIVVQVEKEERGNKGAALTTFISLAGRYMVLMPNNPRAGGVSRRIEGEDRANLKEVMDHLNCPDDMGLIIRTAGMGRDAEELQWDLDYLLQLWKAISEAATSRPGPFLIYQESKLIIRALRDYLRNDVGEILIDNEELYHDARDFVQQVMPNNLRKLKLYKDTTPLFSRFQIETQIENAFERTVRLPSGGSIVIDQTEALTAIDINSAKATKGGDIEETAFNTNREAAIEIARQLRIRDAGGLIVIDFIDMDSPRHQREVEETLKDALKLDRARVQLGRISRFGLMEMSRQRLRPSLGESTQIVCPRCTGHGRIRSIESLSLSALRLVEEHAMKDNTGQVLVQAPSSVANFLLNEKRRQVSEIEQRHDVAVIIVADEKLETPHLEIQRIKSADMGDSPRPSYDRLTPIVVTPPPQVAQPSAEPERPAVSRVVPASPAPLRPDEDEAPVAAPAPAAAPAAARSAPSPGFWSRVMAFFKGEPEAPAAPVAAAAPAKPARPASPARNERDARRGGRDRDGRDRDGRDRGARGDAQRGGRDGAKPQRAEQPQAKPAQGGQAQQRQDKDKDKEPRQPQGGAQQQARPERQDKPERQDKRQGDNRGPRPQDGRGEAAKADARDNAAPKPAAEPRTAEPRQPEARSEARAAATAGADAKAAEANKPVIAAPLAEDAVAAAPLAAAAPGEVAPGIAADDSGREGGRRRRGRRGGRRRRRNEAGQAGAAGDEDGDFDDEDGDTAADAAAARPANDDTSPRPAAAPRAAAPRDGVTPPATGDAGATTAATSAAPIASAPASPAEAKPEAAARPAAVASVPAPLASSPAAPAAAAPAPAVPTPTPTPTPAAPAPEASAAAASTPVAPTASAPVPAAPAAAASTPTTPATTAPTASTPAAPAPAVAAATPTASAPPASAPVAPAQAAPPAPAASAPAAPTTPAAAVPAPAPETRAATTPAPAAPASAPANPAPLASAPVRTAPIPATPASAVVTPPPAPVVPPRVAPAKPVVDSSVPAPPRSAPIPVSAAPAEPKPMPVPPAPAATPAPQPAPVKLAVPTAVASAPIAGAARPAAPEAAKPAAQLSLGMPEPQPELPAGTSVRQAVSSALRAPPAARPVTPAAKADAKPAESDDKPTEGDDKSA*