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scnpilot_p_inoc_scaffold_187_91

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(89587..90372)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBM9_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 261.0
  • Bit_score: 423
  • Evalue 2.10e-115
Lipopolysaccharide ABC transporter, ATP-binding protein lptB {ECO:0000313|EMBL:GAO54434.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; N similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 256.0
  • Bit_score: 428
  • Evalue 6.90e-117
ABC transporter-like protein similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 261.0
  • Bit_score: 423
  • Evalue 5.90e-116

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
ATGACCCAGACAATCGCCCCCGAAGCCGGCCCTGCCGACCGTCAGTCCGATCCCAACGGCTCGTTTTCCGGGCTGCAGGTCGTGTCCATCGCCAAAAGCTATGACAAGCGCGCGGTCCTCACCGACATCTCGCTGGAGGTGGCCAAGGGCGAGGTGATGGGCCTGCTCGGCCCCAATGGCGCGGGCAAGACGACGTGTTTCTATTCGATCATGGGGCTGGTGCGGCCGGATTCGGGGCGCATCCTGCTCGACGGGATCGATATCACCAATCTGCCGATGTATCGCCGCGCGATTCTGGGCCTTGGCTATCTGCCGCAGGAAACCTCGATCTTTCGCGGGCTGACGGTGGAGCAGAACATTGCCACCGTGCTCGAACTGGTCGAACCCGATCCGGCGACGCGGGCGGGCGAGCTGGAGCGGCTGCTGGAGGAATTCGGCCTGACGCGGCTGCGCGCCAGCCCGTCGATGGCGTTGTCGGGCGGCGAGCGGCGGCGTGCGGAAATTGCCCGCGCGCTGGCGGCCAAGCCCTCGATCATGCTGCTGGACGAGCCTTTCGCGGGTATTGATCCGCTGTCCATCGCCGATATCCGCCATCTGGTGCATGATCTGAAACAGCGCGGCATCGGCGTGCTGATCACTGACCACAATGTGCGCGAAACGCTGGAAATCTGCGACCGCGGCTGCATCATCTATGGCGGACAGGTCTTGTTCGCGGGCAGCCCCGAAGCGCTCGTGGCCGATGAAAACGTGCGCCGCCTCTATCTGGGCGAGGGCTTTACGCTGTGA
PROTEIN sequence
Length: 262
MTQTIAPEAGPADRQSDPNGSFSGLQVVSIAKSYDKRAVLTDISLEVAKGEVMGLLGPNGAGKTTCFYSIMGLVRPDSGRILLDGIDITNLPMYRRAILGLGYLPQETSIFRGLTVEQNIATVLELVEPDPATRAGELERLLEEFGLTRLRASPSMALSGGERRRAEIARALAAKPSIMLLDEPFAGIDPLSIADIRHLVHDLKQRGIGVLITDHNVRETLEICDRGCIIYGGQVLFAGSPEALVADENVRRLYLGEGFTL*