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scnpilot_p_inoc_scaffold_1288_9

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(6289..7515)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirB6 n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IJ31_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 418.0
  • Bit_score: 402
  • Evalue 5.90e-109
  • rbh
type IV secretion system protein VirB6 similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 418.0
  • Bit_score: 402
  • Evalue 1.70e-109
Type IV secretion system protein VirB6 {ECO:0000313|EMBL:CCA91657.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 418.0
  • Bit_score: 402
  • Evalue 8.30e-109

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Taxonomy

Novosphingobium sp. PP1Y → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1227
ATGAGCGCCTGCGATGCCTTGGTGGACAATGCCTCGCAAGGTGTGAGCGTGGCCTTGCGCGCGGTAGATTGCATGGCCAACGAGACCGCCGCCAGCACATTTGCACGATTGTTTGGCGGTCAAGGGGCTTTGCTGCCCGCTCTTACCATTCTGCTTACGCTGTATATTGTTATATTCGCCATTGGCCTGCTGACCGGGCGCAGTTCCATCAGCCTTTCATCACTGACCCCGCGCATGCTGACTTTGGGGTTGGTGCTGACTTTCGCCACCAGTTGGGCCGCTTATCAGAGCGTTGTATGGAATCTCGCCACTGGTGCGCCGGACGAATTGGCTGGTGTTTTGCTGGGCGCCAAGGGCTCTGCCACGCAAGTGTTTGGTGACAGGATCGATCTGGTGATGGGGGCGATTGCGGACGCAGCATCGCAAGGGCAGCAAGGGGCAGGACAAAGCCAGGCCGCCGAAGGCGCGGCGCAGCAGGCCGTAGCAGCGCAGGCCAGCACATTTTCGCCGCGTAACCTATTGTGGCTGTCCGACATGATCTTATTGCTGGGTACAGTTGGCGTTTTGTTGACCGCGCGCATCGCTTTGGCCGTTTTGTTGGCTATCGGGCCTGCCTTTATTGTGTTGGCGCTATTCAATGGCACGCGTGGTCTGTTTGTTGGCTGGGTGCGCGGCTTGGTGATGATGGCTCTCGTGCCGCTGTTCGTCGTGGTGGGGGGGGCTATTACCCTTCAGCTAACCCTACCTTTGATTGCCCGCCTGACACCCGCCCAAGGCATTGATGGCAGAGTGGCTTTGGGTCTGTTCCTGATTGCCTCCGTTCACGCCGCCTTGATGAGCCTGGCGATGAAAGTAACCGGCGCTATGGTATCGGGTTGGCAGGTATTTGGTATGGCTAGACGTGTGGGCCAAGGGCTTAATCGTCAATCCGATGCTGCTTCGGCCACAATGCCCGCTTTGATAGCGCAGAATGCGCCGCAATCCGCCTACGCAAATACCAATGCTGGGCATGCATCTAGTCGTATGGCGGCAATCGCTGCGATACCTGTCATGATGGAATCTGGTGCCAGTGAGCCAGCGTCGATGCCCGAGCGCAGGCTGGTTATTCAAAACAGCACTAATGCAGCAGAGCCTGTTCGCAGCACGCCCAACGCGGGCGAGCGCACAAGGGGTGTCGGTAGCGCTTTTCGCTCGCCAACCTCCCCGTCTTCGGAGATTATGCGATGA
PROTEIN sequence
Length: 409
MSACDALVDNASQGVSVALRAVDCMANETAASTFARLFGGQGALLPALTILLTLYIVIFAIGLLTGRSSISLSSLTPRMLTLGLVLTFATSWAAYQSVVWNLATGAPDELAGVLLGAKGSATQVFGDRIDLVMGAIADAASQGQQGAGQSQAAEGAAQQAVAAQASTFSPRNLLWLSDMILLLGTVGVLLTARIALAVLLAIGPAFIVLALFNGTRGLFVGWVRGLVMMALVPLFVVVGGAITLQLTLPLIARLTPAQGIDGRVALGLFLIASVHAALMSLAMKVTGAMVSGWQVFGMARRVGQGLNRQSDAASATMPALIAQNAPQSAYANTNAGHASSRMAAIAAIPVMMESGASEPASMPERRLVIQNSTNAAEPVRSTPNAGERTRGVGSAFRSPTSPSSEIMR*