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scnpilot_p_inoc_scaffold_1400_12

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(9547..9969)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 140.0
  • Bit_score: 254
  • Evalue 7.40e-65
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y709_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 140.0
  • Bit_score: 254
  • Evalue 5.30e-65
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 140.0
  • Bit_score: 225
  • Evalue 1.30e-56

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
ATGCGCCTGCACGTTATTGCCAGAGGGAAGATCGGGCGTTCGCCCGAGGCAGACCTCGTCGCGCGCTATGAAAAGCGCATCCAGTGGCCGATGAAGCTTACCGAGCTTCCGGAAACGGGCGGCTCCATTGCCGAGCCTCTCACCCCTTGCCGCACCGTGTTGCTGGACGAGCGCGGCAAGCAGCTTTCCTCCGAGGAGTTTGCCGCTTTGCTCGGCCGGTGGCGGGACGATGGCGTGCGTGAGGCCCGCTTCGTGCTGGGCGCGGCGGATGGGCATGGCGATGCCGCGCGGCAGGAAGCTGATCTGCTGCTGGCCTTCGGCAAGGCAACCTGGCCGCATCTGCTGGCTCGGGCGATGCTGATGGAACAATTGTTCCGCGCCACTTCGATCCTTGCAGGCCATCCCTATCATCGGGCAGGCTAG
PROTEIN sequence
Length: 141
MRLHVIARGKIGRSPEADLVARYEKRIQWPMKLTELPETGGSIAEPLTPCRTVLLDERGKQLSSEEFAALLGRWRDDGVREARFVLGAADGHGDAARQEADLLLAFGKATWPHLLARAMLMEQLFRATSILAGHPYHRAG*