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SCNpilot_solid_1_scaffold_4_102

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 117362..118144

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D41CA8 similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 255.0
  • Bit_score: 408
  • Evalue 5.30e-111
  • rbh
Lipopolysaccharide ABC transporter, ATP-binding protein LptB similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 256.0
  • Bit_score: 458
  • Evalue 1.60e-126
  • rbh
Lipopolysaccharide ABC transporter, ATP-binding protein LptB {ECO:0000313|EMBL:CDM23154.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 256.0
  • Bit_score: 458
  • Evalue 8.10e-126

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGTCCGCCATCGTACATTCATCTTCCGAACCCCCGCGCGGCAGCGGCTGCCTTCAGGCCATCGGCCTGGGCAAGACCTTCGGCCGGCGCACGGTCGTCCAGGACGTTTCCCTGTCCGTCGACAGCGGCGAAGTCGTCGGCCTGCTGGGCCCCAACGGCGCGGGAAAGACCACCAGCTTCTACATGATCGTCGGCCTGATCCCGGCCGACACCGGCCGCATCGCCATCGACCACCACGACGTCACGGGCGTGCCCATGCACAAGCGCGCCCGGCTGGGGCTGTCGTACCTGCCCCAGGACGCCTCCGTCTTCCGCCGCCTGACCGTGGAACAGAACATCCGCGCCGTGCTGGAACTGCAGCGCGACGCGCACGGCCACGCCCTGTCGTCCCACGCGATCGAGGAACACCTTGAATCCCTGATCGACGAACTGCAGATCGAACACATCCGCCGCAACATGGCGCTGTCGCTGTCCGGCGGGGAACGTCGCCGGGTGGAAATCGCCCGCGCCCTGGCCACGCACCCGCGATTCATCCTGCTGGACGAACCCTTCGCCGGGGTCGACCCGATCGCCGTCATCGAGATCCAGCGCATCGTGCAGTTCCTGCGCGGGCGCAATATCGGCGTCCTGATCACCGACCACAACGTGCGCGAAACCCTGGGCATCTGCGACCGGGCCTACATCATCAGCGAAGGCCGGGTGCTGACCAGCGGGCACCCCAACGAGATCGTCGACAACGAGGCCGTGCGCCAGGTGTACCTGGGCAAGAACTTCCGCATGTAG
PROTEIN sequence
Length: 261
MSAIVHSSSEPPRGSGCLQAIGLGKTFGRRTVVQDVSLSVDSGEVVGLLGPNGAGKTTSFYMIVGLIPADTGRIAIDHHDVTGVPMHKRARLGLSYLPQDASVFRRLTVEQNIRAVLELQRDAHGHALSSHAIEEHLESLIDELQIEHIRRNMALSLSGGERRRVEIARALATHPRFILLDEPFAGVDPIAVIEIQRIVQFLRGRNIGVLITDHNVRETLGICDRAYIISEGRVLTSGHPNEIVDNEAVRQVYLGKNFRM*