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SCNpilot_solid_1_scaffold_28_159

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(153927..154232)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S14 n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037B58E4 similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 101.0
  • Bit_score: 190
  • Evalue 8.80e-46
SSU ribosomal protein S14p / SSU ribosomal protein S14p, zinc-independent similarity KEGG
DB: KEGG
  • Identity: 97.0
  • Coverage: 101.0
  • Bit_score: 196
  • Evalue 4.50e-48
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellanie similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 101.0
  • Bit_score: 196
  • Evalue 2.20e-47

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
GTGGCAAAACTTTCCCTCATCAATCGCGACATCAAGCGCGCCAAGCTGGCTGAAAAGTTCGCGGCGAAGCGCACCGCACTGAAGGCGATCATCGCCGATCAGTCCAAATCCGACGAAGAACGCTATCAGGCTCGCCTGGCCCTGCAACAGCTGCCCCGCAACGCCAACCCCACCCGCCAGCGCAATCGCTGCGTGGTGACGGGTCGTCCCCGCGGCGTGTTCAGCAAGTTCGGGCTGACGCGTCACAAACTGCGTGAAATGGCCATGCGCGGCGAAGTGCCGGGCATGACCAAGGCCAGCTGGTAG
PROTEIN sequence
Length: 102
VAKLSLINRDIKRAKLAEKFAAKRTALKAIIADQSKSDEERYQARLALQQLPRNANPTRQRNRCVVTGRPRGVFSKFGLTRHKLREMAMRGEVPGMTKASW*