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SCNpilot_solid_2_scaffold_28

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Displaying items 61-90 of 211 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_28_60
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71030..71314
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F75E66
Uncharacterized protein {ECO:0000313|EMBL:EKS39694.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
SCNpilot_solid_2_scaffold_28_61
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71475..72791)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NHD1_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28471.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
putative oxalate/formate antiporter; K08177 MFS transporter, OFA family, oxalate/formate antiporter
SCNpilot_solid_2_scaffold_28_62
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73039..74370)
DNA (1332bp) protein (444aa)
C4-dicarboxylate transport protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V646_9BRAD rbh
C4-dicarboxylate transport protein {ECO:0000256|HAMAP-Rule:MF_01300}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis
dctA; C4-dicarboxylate transport protein; K11103 aerobic C4-dicarboxylate transport protein rbh
SCNpilot_solid_2_scaffold_28_63
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74585..76465
DNA (1881bp) protein (627aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afi
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V645_9BRAD rbh
C4-dicarboxylate transport sensor protein DctB rbh
SCNpilot_solid_2_scaffold_28_64
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76462..77832
DNA (1371bp) protein (457aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V644_9BRAD rbh
C4-dicarboxylate transport transcriptional regulatory protein DctD {ECO:0000313|EMBL:CEG08211.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afi
C4-dicarboxylate transport transcriptional regulatory protein DctD rbh
SCNpilot_solid_2_scaffold_28_65
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77915..78136)
DNA (222bp) protein (74aa)
Putative lipoprotein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V643_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG08213.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
lipoprotein
SCNpilot_solid_2_scaffold_28_66
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78425..79324
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V641_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI51788.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
SCNpilot_solid_2_scaffold_28_67
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79498..80136
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQI2_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28478.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_solid_2_scaffold_28_68
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80178..80858
DNA (681bp) protein (227aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Afipia sp. 1NLS2 RepID=D6V638_9BRAD rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFI51785.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;"
oxidoreductase rbh
SCNpilot_solid_2_scaffold_28_69
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80931..82136)
DNA (1206bp) protein (402aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Afipia sp. 1NLS2 RepID=D6V634_9BRAD rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EFI51781.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Af
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein rbh
SCNpilot_solid_2_scaffold_28_70
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82326..83504)
DNA (1179bp) protein (393aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V633_9BRAD rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EFI51780.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
secretion protein HlyD rbh
SCNpilot_solid_2_scaffold_28_71
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83494..86685)
DNA (3192bp) protein (1064aa)
Acriflavin resistance protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V632_9BRAD rbh
Acriflavin resistance protein {ECO:0000313|EMBL:EFI51779.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
mdtC1; multidrug resistance protein MdtC rbh
SCNpilot_solid_2_scaffold_28_72
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86919..87248
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLS5_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28485.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
small multidrug resistance protein; K03297 small multidrug resistance protein, SMR family
SCNpilot_solid_2_scaffold_28_73
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87259..87408
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V630_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG08225.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_28_74
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87423..87662
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NCZ8_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28487.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_solid_2_scaffold_28_75
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87669..88208)
DNA (540bp) protein (180aa)
CreA family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V628_9BRAD rbh
CreA family protein {ECO:0000313|EMBL:EFI51775.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
creA; CreA family protein; K05805 CreA protein
SCNpilot_solid_2_scaffold_28_76
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88461..89777
DNA (1317bp) protein (439aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V627_9BRAD rbh
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EFI51774.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sour
hypothetical protein rbh
SCNpilot_solid_2_scaffold_28_77
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89888..90823
DNA (936bp) protein (312aa)
Polysaccharide deacetylase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V626_9BRAD rbh
Bifunctional xylanase/deacetylase {ECO:0000313|EMBL:CEG08229.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat
putative polysaccharide deacetylase rbh
SCNpilot_solid_2_scaffold_28_78
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90834..91379
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NHE7_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28491.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_solid_2_scaffold_28_79
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91384..91836)
DNA (453bp) protein (151aa)
DoxX family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V624_9BRAD
HR-like lesion-inducing {ECO:0000313|EMBL:CEG08231.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
DoxX protein
SCNpilot_solid_2_scaffold_28_80
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91990..94290)
DNA (2301bp) protein (767aa)
maeA; NAD-dependent malic enzyme MaeA; K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] rbh
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQJ3_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28493.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_solid_2_scaffold_28_81
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(94338..96125)
DNA (1788bp) protein (596aa)
aspS; aspartate-tRNA ligase AspS (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] rbh
Aspartate--tRNA ligase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V622_9BRAD rbh
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:EFI51769.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_solid_2_scaffold_28_82
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96518..97678
DNA (1161bp) protein (387aa)
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=883080 species="Bacteria; Proteobacteria; Alph
rnd; ribonuclease D (EC:3.1.13.5); K03684 ribonuclease D [EC:3.1.13.5] rbh
Ribonuclease D n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLT6_AFIFE rbh
SCNpilot_solid_2_scaffold_28_83
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97675..98247)
DNA (573bp) protein (191aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JGK0_OLICO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI06417.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
SCNpilot_solid_2_scaffold_28_84
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98253..99779)
DNA (1527bp) protein (509aa)
Ppx/GppA phosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] rbh
Ppx/GppA phosphatase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V619_9BRAD rbh
Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase {ECO:0000313|EMBL:CEG08237.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sou
SCNpilot_solid_2_scaffold_28_85
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99796..101982)
DNA (2187bp) protein (729aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
ppk; polyphosphate kinase (EC:2.7.4.1); K00937 polyphosphate kinase [EC:2.7.4.1] rbh
Polyphosphate kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V618_9BRAD rbh
SCNpilot_solid_2_scaffold_28_86
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102176..102865)
DNA (690bp) protein (230aa)
Chromosomal replication initiator, DnaA n=1 Tax=Afipia sp. 1NLS2 RepID=D6V617_9BRAD rbh
Chromosomal replication initiator, DnaA {ECO:0000313|EMBL:EFI51764.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
hypothetical protein rbh
SCNpilot_solid_2_scaffold_28_87
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102874..103443)
DNA (570bp) protein (190aa)
CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] rbh
CDP-alcohol phosphatidyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V616_9BRAD rbh
Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 2 {ECO:0000313|EMBL:CEG08240.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizo
SCNpilot_solid_2_scaffold_28_88
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103576..104649
DNA (1074bp) protein (358aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
purM; phosphoribosylaminoimidazole synthetase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] rbh
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V615_9BRAD rbh
SCNpilot_solid_2_scaffold_28_89
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104646..105299
DNA (654bp) protein (218aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
purN; phosphoribosylglycinamide formyltransferase PurN; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] rbh
Phosphoribosylglycinamide formyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V614_9BRAD rbh
Displaying items 61-90 of 211 in total

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