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SCNpilot_solid_2_scaffold_28

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Displaying items 91-120 of 211 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_28_90
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105502..105945
DNA (444bp) protein (148aa)
Autotransporter beta-domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V613_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG08244.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_28_91
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105935..106771)
DNA (837bp) protein (279aa)
Integral membrane protein TerC n=1 Tax=Afipia sp. 1NLS2 RepID=D6V612_9BRAD rbh
Integral membrane protein, YjbE family {ECO:0000313|EMBL:CEG08245.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis
putative transmembrane protein rbh
SCNpilot_solid_2_scaffold_28_92
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(106967..107824)
DNA (858bp) protein (286aa)
Integral membrane protein TerC n=1 Tax=Afipia sp. 1NLS2 RepID=D6V611_9BRAD rbh
Integral membrane protein TerC {ECO:0000313|EMBL:EFI51758.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
putative transmembrane protein
SCNpilot_solid_2_scaffold_28_93
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107945..108367)
DNA (423bp) protein (141aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:M
Nucleoside diphosphate kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V610_9BRAD
nucleoside diphosphate kinase
SCNpilot_solid_2_scaffold_28_94
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108658..108993
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8ND16_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28507.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
Sulfur globule protein
SCNpilot_solid_2_scaffold_28_95
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109190..109429
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQK7_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28508.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_solid_2_scaffold_28_96
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109487..111346
DNA (1860bp) protein (620aa)
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V607_9BRAD rbh
ABC transporter related protein {ECO:0000313|EMBL:EFI51754.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;
ABC transporter ATPase; K06158 ATP-binding cassette, subfamily F, member 3 rbh
SCNpilot_solid_2_scaffold_28_97
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(111362..111877)
DNA (516bp) protein (172aa)
Putative lipoprotein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V606_9BRAD rbh
Putative lipoprotein {ECO:0000313|EMBL:EFI51753.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
lipoprotein
SCNpilot_solid_2_scaffold_28_98
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112103..112570)
DNA (468bp) protein (156aa)
putative DNA polymerase III, chi subunit; K02339 DNA polymerase III subunit chi [EC:2.7.7.7]
DNA polymerase III chi subunit HolC n=1 Tax=Afipia sp. 1NLS2 RepID=D6V605_9BRAD rbh
DNA polymerase III subunit chi {ECO:0000313|EMBL:CEG08253.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scr
SCNpilot_solid_2_scaffold_28_99
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112604..114106)
DNA (1503bp) protein (501aa)
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] rbh
Probable cytosol aminopeptidase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V604_9BRAD rbh
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=666684 speci
SCNpilot_solid_2_scaffold_28_100
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114579..115661
DNA (1083bp) protein (361aa)
Permease YjgP/YjgQ family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V603_9BRAD rbh
Permease YjgP/YjgQ family protein {ECO:0000313|EMBL:EFI51750.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2
permease YjgP/YjgQ; K11720 lipopolysaccharide export system permease protein rbh
SCNpilot_solid_2_scaffold_28_101
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115712..118165
DNA (2454bp) protein (818aa)
Organic solvent tolerance protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V602_9BRAD rbh
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
organic solvent tolerance protein; K04744 LPS-assembly protein rbh
SCNpilot_solid_2_scaffold_28_102
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118230..119174
DNA (945bp) protein (315aa)
SurA N-domain family; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] rbh
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLV5_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28515.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_solid_2_scaffold_28_103
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119180..120190
DNA (1011bp) protein (337aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosph
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] rbh
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V600_9BRAD rbh
SCNpilot_solid_2_scaffold_28_104
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


120187..121038
DNA (852bp) protein (284aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
ksgA; dimethyladenosine transferase (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] rbh
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Afipia felis ATCC 53690 RepID=K8ND25_AFIFE rbh
SCNpilot_solid_2_scaffold_28_105
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121044..122108
DNA (1065bp) protein (355aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5Z8_9BRAD rbh
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:EFI51745.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
alcohol dehydrogenase rbh
SCNpilot_solid_2_scaffold_28_106
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122462..123514
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5Z6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI51743.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_solid_2_scaffold_28_107
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123411..124061)
DNA (651bp) protein (217aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
gmk; guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8] rbh
Guanylate kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5Z5_9BRAD rbh
SCNpilot_solid_2_scaffold_28_108
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124067..124954)
DNA (888bp) protein (296aa)
YicC domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5Z4_9BRAD rbh
YicC domain protein {ECO:0000313|EMBL:EFI51741.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
SCNpilot_solid_2_scaffold_28_109
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125074..126435)
DNA (1362bp) protein (454aa)
Aminodeoxychorismate lyase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5Z3_9BRAD rbh
Aminodeoxychorismate lyase {ECO:0000313|EMBL:EFI51740.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein; K07082 UPF0755 protein rbh
SCNpilot_solid_2_scaffold_28_110
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126534..127799)
DNA (1266bp) protein (422aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobi
fabF3; 3-oxoacyl-ACP synthase (EC:2.3.1.179); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] rbh
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5Z2_9BRAD rbh
SCNpilot_solid_2_scaffold_28_111
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127884..128123)
DNA (240bp) protein (80aa)
Acyl carrier protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5Z1_9BRAD
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria;
acpP; acyl carrier protein AcpP; K02078 acyl carrier protein
SCNpilot_solid_2_scaffold_28_112
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128516..129253)
DNA (738bp) protein (246aa)
fabG; 3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] rbh
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLW6_AFIFE rbh
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EKS28525.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
SCNpilot_solid_2_scaffold_28_113
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129271..130179)
DNA (909bp) protein (303aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizob
fabD2; malonyl CoA-acyl carrier protein transacylase FabD (EC:2.3.1.39); K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] rbh
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5Y9_9BRAD rbh
SCNpilot_solid_2_scaffold_28_114
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130318..131085)
DNA (768bp) protein (256aa)
DNA-3-methyladenine glycosylase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H6M3_9BRAD
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:ERF80403.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhiz
hypothetical protein
SCNpilot_solid_2_scaffold_28_115
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131208..131402)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TEM1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE04890.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
SCNpilot_solid_2_scaffold_28_116
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


131883..132338
DNA (456bp) protein (152aa)
30S ribosomal protein S6 n=1 Tax=Afipia felis ATCC 53690 RepID=K8ND34_AFIFE
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 536
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6
SCNpilot_solid_2_scaffold_28_117
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


132344..132583
DNA (240bp) protein (80aa)
30S ribosomal protein S18 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5Y7_9BRAD
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18
SCNpilot_solid_2_scaffold_28_118
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132728..133693
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5Y6_9BRAD rbh
Putative membrane protein {ECO:0000313|EMBL:CEG08273.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch
hypothetical protein rbh
SCNpilot_solid_2_scaffold_28_119
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


133750..134346
DNA (597bp) protein (199aa)
50S ribosomal protein L9 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLX0_AFIFE rbh
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scrat
rplI; 50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 rbh
Displaying items 91-120 of 211 in total

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