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SCNpilot_solid_2_scaffold_312

Search features with annotation key words

Displaying items 31-60 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_312_31
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27075..30395
DNA (3321bp) protein (1107aa)
CzcA family heavy metal efflux pump n=1 Tax=Afipia felis ATCC 53690 RepID=K8NU78_AFIFE rbh
CzcA family heavy metal efflux pump {ECO:0000313|EMBL:EKS29753.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis A
czcA4; cation efflux system protein CzcA rbh
SCNpilot_solid_2_scaffold_312_32
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30401..30940
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NMZ6_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29754.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
cytochrome B561; K12262 cytochrome b561
SCNpilot_solid_2_scaffold_312_33
unknown

Not on your lists

comp(30773..31354)
DNA (582bp) protein (194aa)

This feature has no annotations

SCNpilot_solid_2_scaffold_312_34
unknown

Not on your lists

31390..31572
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_solid_2_scaffold_312_35
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31653..31886)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQF1_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29710.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_solid_2_scaffold_312_36
unknown

Not on your lists

comp(31994..32215)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_solid_2_scaffold_312_37
Bartonella tamiae, Bartonella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32175..32375)
DNA (201bp) protein (67aa)
alcohol dehydrogenase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035D544E
Uncharacterized protein {ECO:0000313|EMBL:EJF91560.1}; TaxID=1094558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae; Bartonella.;" source="Bartonella tamiae Th239.
cytochrome C
SCNpilot_solid_2_scaffold_312_trna_1
unknown

Not on your lists

comp(32722..32793)
DNA (72bp)
transferRNA
SCNpilot_solid_2_scaffold_312_38
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32855..33142)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7Q1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG09247.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_312_39
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33144..34220
DNA (1077bp) protein (359aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiacea
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] rbh
Pseudouridine synthase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLS4_AFIFE rbh
SCNpilot_solid_2_scaffold_312_40
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34443..35342
DNA (900bp) protein (300aa)
RNA polymerase sigma factor RpoH n=1 Tax=Afipia felis ATCC 53690 PF9_AFIFE">RepID=K8NPF9_AFIFE rbh
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteri
rpoH; RNA polymerase factor sigma-32; K03089 RNA polymerase sigma-32 factor rbh
SCNpilot_solid_2_scaffold_312_41
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35929..36147
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NFZ5_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29397.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_solid_2_scaffold_312_42
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36213..36821)
DNA (609bp) protein (203aa)
formyl transferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] rbh
Formyl transferase domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7P6_9BRAD rbh
Formyl transferase domain protein {ECO:0000313|EMBL:EFI51256.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2
SCNpilot_solid_2_scaffold_312_43
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36818..38359)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7P5_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI51255.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
SCNpilot_solid_2_scaffold_312_44
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38422..39714)
DNA (1293bp) protein (431aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
purA; adenylosuccinate synthase PurA (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] rbh
Adenylosuccinate synthetase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7P4_9BRAD rbh
SCNpilot_solid_2_scaffold_312_45
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39950..40876
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7P3_9BRAD rbh
Carboxylate/amino acid/amine transporter {ECO:0000313|EMBL:CEG09255.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia feli
putative transmembrane protein rbh
SCNpilot_solid_2_scaffold_312_46
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40941..42530)
DNA (1590bp) protein (530aa)
serA2; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95); K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] rbh
D-3-phosphoglycerate dehydrogenase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7P1_9BRAD rbh
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EFI51251.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS
SCNpilot_solid_2_scaffold_312_47
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42656..43828)
DNA (1173bp) protein (391aa)
Phosphoserine transaminase {ECO:0000256|SAAS:SAAS00182444}; EC=2.6.1.52 {ECO:0000256|SAAS:SAAS00182444};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobi
serC; phosphoserine aminotransferase SerC (EC:2.6.1.52); K00831 phosphoserine aminotransferase [EC:2.6.1.52] rbh
Phosphoserine aminotransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7P0_9BRAD rbh
SCNpilot_solid_2_scaffold_312_48
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44011..44841
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7N9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI51249.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
putative transmembrane protein rbh
SCNpilot_solid_2_scaffold_312_49
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44852..45679)
DNA (828bp) protein (276aa)
Porin n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7N8_9BRAD rbh
Opacity protein antigens {ECO:0000313|EMBL:CEG09260.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch d
hypothetical protein
SCNpilot_solid_2_scaffold_312_50
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45821..46657)
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q131V6_RHOPS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE41133.1}; Flags: Precursor;; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" sourc
SCNpilot_solid_2_scaffold_312_51
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46910..48154)
DNA (1245bp) protein (415aa)
Major facilitator superfamily MFS_1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7N6_9BRAD rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFI51246.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NL
fsr; fosmidomycin resistance protein; K08223 MFS transporter, FSR family, fosmidomycin resistance protein rbh
SCNpilot_solid_2_scaffold_312_52
unknown

Not on your lists

48155..48385
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_solid_2_scaffold_312_53
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48272..49618)
DNA (1347bp) protein (449aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; TaxID=1035 species="Bacteria;
glmM; phosphoglucosamine mutase (EC:5.4.2.10); K03431 phosphoglucosamine mutase [EC:5.4.2.10] rbh
Phosphoglucosamine mutase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7N5_9BRAD rbh
SCNpilot_solid_2_scaffold_312_54
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49838..50014)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7N4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI51244.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_solid_2_scaffold_312_55
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50121..51275
DNA (1155bp) protein (385aa)
lldD; L-lactate dehydrogenase LldD (EC:1.1.2.3); K00101 L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] rbh
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJY4_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29411.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_solid_2_scaffold_312_56
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51322..51939)
DNA (618bp) protein (206aa)
Putative lipoprotein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7N3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG09265.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_312_57
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52001..52849)
DNA (849bp) protein (283aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000
aroE; shikimate dehydrogenase AroE (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] rbh
Shikimate dehydrogenase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7N2_9BRAD rbh
SCNpilot_solid_2_scaffold_312_58
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52908..54671)
DNA (1764bp) protein (588aa)
Sulphate transporter n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7N1_9BRAD rbh
Sulphate transporter {ECO:0000313|EMBL:EFI51241.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
sulfate transporter; K03321 sulfate permease, SulP family rbh
SCNpilot_solid_2_scaffold_312_59
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54668..55156)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7N0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG09270.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
Displaying items 31-60 of 67 in total

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