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SCNpilot_expt_500_bf_scaffold_4257

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4257_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..344)
DNA (342bp) protein (114aa)
3-hydroxybutyrate dehydrogenase n=1 Tax=Dyella japonica RepID=UPI0002D26F82
3-hydroxybutyrate dehydrogenase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_4257_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(514..2301)
DNA (1788bp) protein (596aa)
arginine decarboxylase (EC:4.1.1.19)
Biosynthetic arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01417}; Short=ADC {ECO:0000256|HAMAP-Rule:MF_01417};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01417, ECO:0000256|SAAS:SAAS00212226};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Biosynthetic arginine decarboxylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WGX2_9GAMM
SCNpilot_expt_500_bf_scaffold_4257_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2707..3360
DNA (654bp) protein (218aa)
spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WGX3_9GAMM
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_4257_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3468..3662)
DNA (195bp) protein (65aa)
NusB antitermination factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPN8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87845.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4257_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3817..4857
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPN9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89180.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_4257_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4998..5630
DNA (633bp) protein (211aa)
Partition protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPP0_9GAMM rbh
Partition protein {ECO:0000313|EMBL:EIL89181.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ATPase involved in chromosome partitioning rbh
SCNpilot_expt_500_bf_scaffold_4257_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5670..6143
DNA (474bp) protein (158aa)
Phosphohistidine phosphatase SixA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBZ3_9GAMM
Phosphohistidine phosphatase SixA {ECO:0000313|EMBL:EIL96984.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
phosphohistidine phosphatase SixA
SCNpilot_expt_500_bf_scaffold_4257_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6282..8156
DNA (1875bp) protein (625aa)
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NLH4_9GAMM rbh
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase rbh
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase {ECO:0000313|EMBL:AGG90917.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_4257_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8226..8438
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRJ1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89832.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF2945)
SCNpilot_expt_500_bf_scaffold_4257_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8442..8987
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRJ0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89831.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
Displaying 10 items

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