Alias: AMDSBA5_C27
| name | lists | location/seqs | functional annotations | notes |
|---|---|---|---|---|
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AMDSBA5_28_1
unknown
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Not on your lists |
2..835
----------------- DNA (834bp) protein (278aa) |
2..835 + ( gc_cont=0.410)
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AMDSBA5_28_2
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria
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Not on your lists |
884..2524
----------------- DNA (1641bp) protein (547aa) |
family 5 extracellular solute-binding protein
Dipeptide ABC superfamily ATP binding cassette transporter, binding protein n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=D7WD23_9CORY (db=UNIREF evalue=3.1e-16 bit_score=92.4 identity=23.7 coverage=63.61974405850091)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=14 to=28)
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AMDSBA5_28_3
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
2537..3490
----------------- DNA (954bp) protein (318aa) |
predicted ABC-type dipeptide/oligopeptide/nickel transport systems, permease component
ABC-type transport system permease protein (Probable substrate dipeptides/oligopeptides) n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QVE8_9EURY (db=UNIREF evalue=1.9e-50 bit_score=205.3 identity=36.3 coverage=99.05660377358491)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=101 to=123)
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AMDSBA5_28_4
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
3500..4399
----------------- DNA (900bp) protein (300aa) |
oligopeptide ABC transporter permease
Putative oligopeptide ABC transporter n=2 Tax=Leptospirillum sp. Group II PF7_9BACT">RepID=A3EPF7_9BACT (db=UNIREF evalue=5.6e-44 bit_score=183.7 identity=39.0 coverage=82.33333333333334)
seg (db=Seg db_id=seg from=36 to=58)
transmembrane_regions (db=TMHMM db_id=tmhmm from=263 to=285)
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AMDSBA5_28_5
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
4405..5415
----------------- DNA (1011bp) protein (337aa) |
beta-lactamase
Beta-lactamase n=1 Tax=Spirochaeta smaragdinae DSM 11293 RepID=E1R132_SPISS (db=UNIREF evalue=1.1e-24 bit_score=119.8 identity=29.7 coverage=78.33827893175074)
beta-lactamase/transpeptidase-like (db=superfamily db_id=SSF56601 from=2 to=335 evalue=4.3e-60 interpro_id=IPR012338 interpro_description=Beta-lactamase/transpeptidase-like)
no description (db=Gene3D db_id=G3DSA:3.40.710.10 from=1 to=331 evalue=7.9e-57 interpro_id=IPR012338 interpro_description=Beta-lactamase/transpeptidase-like)
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AMDSBA5_28_6
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
5470..6195
----------------- DNA (726bp) protein (242aa) |
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JIC1_DESDE (db=UNIREF evalue=1.3e-14 bit_score=85.9 identity=27.2 coverage=76.44628099173553)
type I phosphodiesterase/nucleotide pyrophosphatase
seg (db=Seg db_id=seg from=106 to=115)
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AMDSBA5_28_7
RLO_PLX_64_10, Bacteria
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Not on your lists |
6267..7223
----------------- DNA (957bp) protein (319aa) |
hypothetical protein
Putative uncharacterized protein n=1 Tax=Frankia sp. CN3 RepID=G6HG03_9ACTO (db=UNIREF evalue=4.6e-28 bit_score=131.0 identity=34.2 coverage=84.63949843260188)
seg (db=Seg db_id=seg from=24 to=59)
Arabinanase/levansucrase/invertase (db=superfamily db_id=SSF75005 from=23 to=308 evalue=2.1e-08 interpro_id=IPR023296 interpro_description=Glycosyl hydrolase family 43, five-bladed beta-propellor domain)
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AMDSBA5_28_8
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
7225..9168
----------------- DNA (1944bp) protein (648aa) |
hypothetical protein
N-acetylmuramic acid 6-phosphate etherase n=3 Tax=Edwardsiella RepID=MURQ_EDWI9 (db=UNIREF evalue=9.3e-52 bit_score=210.7 identity=40.8 coverage=43.05555555555556)
no description (db=Gene3D db_id=G3DSA:3.40.50.10490 from=328 to=588 evalue=1.1e-70)
SIS domain (db=superfamily db_id=SSF53697 from=338 to=588 evalue=1.6e-57)
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AMDSBA5_28_9
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria
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Not on your lists |
9153..10352
----------------- DNA (1200bp) protein (400aa) |
ROK family protein
Xylose repressor n=3 Tax=Caldicellulosiruptor RepID=XYLR_ANATD (db=UNIREF evalue=2.9e-35 bit_score=155.2 identity=36.2 coverage=64.75)
seg (db=Seg db_id=seg from=12 to=25)
seg (db=Seg db_id=seg from=139 to=154)
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AMDSBA5_28_10
Paenibacillus sp. JCM 10914, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
10349..11296
----------------- DNA (948bp) protein (316aa) |
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase n=1 Tax=Paenibacillus vortex V453 RepID=E5YSE9_9BACL (db=UNIREF evalue=7.1e-13 bit_score=80.5 identity=41.1 coverage=35.12658227848101)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=149 evalue=2.2e-14 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=123 to=300 evalue=1.3e-14 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
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AMDSBA5_28_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
11750..13984
----------------- DNA (2235bp) protein (745aa) |
diguanylate cyclase and metal dependent phosphohydrolase
rbh
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Halomonas sp. GFAJ-1 RepID=H0J2V8_9GAMM (db=UNIREF evalue=3.7e-12 bit_score=79.3 identity=28.6 coverage=29.395973154362416)
transmembrane_regions (db=TMHMM db_id=tmhmm from=107 to=129)
transmembrane_regions (db=TMHMM db_id=tmhmm from=142 to=159)
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AMDSBA5_28_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
14439..15032
----------------- DNA (594bp) protein (198aa) |
hypothetical protein
Putative uncharacterized protein (Fragment) n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GUX4_9EURY (db=UNIREF evalue=2.3e-09 bit_score=68.2 identity=29.6 coverage=69.1919191919192)
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=45)
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=95)
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AMDSBA5_28_13
RIFOXYA1_FULL_Chromatiales_46_5_curated, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
15440..16918
----------------- DNA (1479bp) protein (493aa) |
diguanylate cyclase
Response regulator n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SMG0_RHOPH (db=UNIREF evalue=1.1e-20 bit_score=107.1 identity=41.7 coverage=33.2657200811359)
transmembrane_regions (db=TMHMM db_id=tmhmm from=226 to=248)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
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AMDSBA5_28_14
Syntrophaceticus schinkii, Syntrophaceticus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
16908..17627
----------------- DNA (720bp) protein (240aa) |
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=51 to=234 evalue=5.5e-22 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=30 to=146 evalue=3.8e-13 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma fact
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=146 to=234 evalue=3.8e-10 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct
(db=HMMPfam db_id=PF04542 from=62 to=127 evalue=3.1e-09 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
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AMDSBA5_28_15
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(17717..18160)
----------------- DNA (444bp) protein (148aa) |
transmembrane_regions (db=TMHMM db_id=tmhmm from=61 to=83)
transmembrane_regions (db=TMHMM db_id=tmhmm from=103 to=125)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PVU3_CATAD
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AMDSBA5_28_16
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
18897..19943
----------------- DNA (1047bp) protein (349aa) |
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus caldus SM-1 RepID=F9ZUA8_ACICS (db=UNIREF evalue=2.5e-51 bit_score=208.4 identity=38.2 coverage=91.40401146131805)
Purine and uridine phosphorylases (db=superfamily db_id=SSF53167 from=70 to=313 evalue=3.0e-06)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=20 evalue=6.0)
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AMDSBA5_28_17
GWB1_OP11_49_7, Gottesmanbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(20395..20787)
----------------- DNA (393bp) protein (131aa) |
20395..20787 - ( gc_cont=0.527)
Transposase, OrfB family, putative
Transposase, OrfB family, putative n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WR94_METH6
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AMDSBA5_28_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(21436..21804)
----------------- DNA (369bp) protein (123aa) |
(db=HMMPfam db_id=PF00563 from=7 to=101 evalue=4.7e-16 interpro_id=IPR001633 interpro_description=Diguanylate phosphodiesterase, EAL domain)
EAL domain-like (db=superfamily db_id=SSF141868 from=6 to=109 evalue=6.1e-16 interpro_id=IPR001633 interpro_description=Diguanylate phosphodiesterase, EAL domain)
EAL (db=ProfileScan db_id=PS50883 from=1 to=115 evalue=16.436 interpro_id=IPR001633 interpro_description=Diguanylate phosphodiesterase, EAL domain)
diguanylate phosphodiesterase
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AMDSBA5_28_19
unknown
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Not on your lists |
comp(22041..22145)
----------------- DNA (105bp) protein (35aa) |
22041..22145 - ( gc_cont=0.505)
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AMDSBA5_28_20
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
22468..22929
----------------- DNA (462bp) protein (154aa) |
response regulator receiver
CheY-like (db=superfamily db_id=SSF52172 from=9 to=127 evalue=3.2e-32 interpro_id=IPR011006 interpro_description=CheY-like superfamily)
no description (db=HMMSmart db_id=SM00448 from=12 to=124 evalue=2.8e-28 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=13 to=141 evalue=1.7e-26)
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AMDSBA5_28_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
22926..24734
----------------- DNA (1809bp) protein (603aa) |
coiled-coil (db=Coil db_id=coil from=375 to=396 evalue=NA)
(db=HMMPfam db_id=PF03961 from=156 to=297 evalue=1.8e-14 interpro_id=IPR005646 interpro_description=Protein of unknown function DUF342)
hypothetical protein
Uncharacterized protein n=1 Tax=Sulfobacillus acidophilus (strain TPY) RepID=F8IBZ7_SULAT
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AMDSBA5_28_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
24786..24998
----------------- DNA (213bp) protein (71aa) |
hypothetical protein
Putative uncharacterized protein n=1 Tax=Sulfobacillus acidophilus DSM 10332 RepID=G8U111_9FIRM (db=UNIREF evalue=4.0e-25 bit_score=119.0 identity=76.8 coverage=95.77464788732394)
Uncharacterized protein n=1 Tax=Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL) RepID=G8U111_SULAD
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AMDSBA5_28_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
25002..25697
----------------- DNA (696bp) protein (232aa) |
putative signal transduction histidine kinase
rbh
putative signal transduction histidine kinase
rbh
Histidine kinase n=2 Tax=Sulfobacillus acidophilus RepID=F8IC01_SULAT (db=UNIREF evalue=7.1e-71 bit_score=272.7 identity=71.9 coverage=76.29310344827587)
coiled-coil (db=Coil db_id=coil from=68 to=89 evalue=NA)
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AMDSBA5_28_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
25694..27142
----------------- DNA (1449bp) protein (483aa) |
putative metal dependent phosphohydrolase
rbh
putative metal dependent phosphohydrolase
rbh
Metal dependent phosphohydrolase n=2 Tax=Sulfobacillus acidophilus RepID=F8IC00_SULAT (db=UNIREF evalue=1.3e-191 bit_score=674.9 identity=66.9 coverage=99.58592132505176)
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AMDSBA5_28_25
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria
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Not on your lists |
27459..28244
----------------- DNA (786bp) protein (262aa) |
Transposase, IS4 family protein n=2 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HLT9_9FIRM (db=UNIREF evalue=5.5e-11 bit_score=73.9 identity=35.2 coverage=45.038167938931295)
transposase, IS4 family protein (db=KEGG evalue=1.4e-09 bit_score=68.9 identity=31.7 coverage=51.908396946564885)
seg (db=Seg db_id=seg from=133 to=141)
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AMDSBA5_28_26
unknown
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Not on your lists |
28267..28452
----------------- DNA (186bp) protein (62aa) |
transmembrane_regions (db=TMHMM db_id=tmhmm from=41 to=60)
seg (db=Seg db_id=seg from=48 to=59)
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AMDSBA5_28_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(29980..30309)
----------------- DNA (330bp) protein (110aa) |
HesB-like domain (db=superfamily db_id=SSF89360 from=4 to=96 evalue=1.4e-13 interpro_id=IPR000361 interpro_description=FeS cluster biogenesis)
HES-B (db=HMMPanther db_id=PTHR10072:SF26 from=1 to=107 evalue=8.1e-11)
HES-B (db=HMMPanther db_id=PTHR10072 from=1 to=107 evalue=8.1e-11)
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AMDSBA5_28_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(30306..30590)
----------------- DNA (285bp) protein (95aa) |
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TX76_9FIRM (db=UNIREF evalue=7.5e-35 bit_score=151.8 identity=74.7 coverage=94.73684210526315)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=51 to=62 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
no description (db=Gene3D db_id=G3DSA:3.30.70.20 from=2 to=89 evalue=2.5e-18)
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AMDSBA5_28_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(30640..30960)
----------------- DNA (321bp) protein (107aa) |
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TX75_9FIRM (db=UNIREF evalue=7.9e-33 bit_score=145.2 identity=78.5 coverage=72.89719626168224)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=12 to=23 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=44 to=55 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
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AMDSBA5_28_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(30971..32785)
----------------- DNA (1815bp) protein (605aa) |
cyclic nucleotide-binding protein
cyclic nucleotide-binding protein
Cyclic nucleotide-binding protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TX74_9FIRM (db=UNIREF evalue=2.5e-277 bit_score=959.9 identity=72.1 coverage=99.3388429752066)
seg (db=Seg db_id=seg from=535 to=544)
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