ggKbase home page

SCNpilot_cont_500_bf_scaffold_100_42

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 48969..49796

Top 3 Functional Annotations

Value Algorithm Source
Betaine/carnitine/choline transporter (BCCT) family transporter n=1 Tax=Myroides odoratimimus CCUG 3837 RepID=K1HCT1_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 274.0
  • Bit_score: 451
  • Evalue 7.50e-124
Choline/carnitine/betaine transporter {ECO:0000313|EMBL:EOR29704.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 274.0
  • Bit_score: 443
  • Evalue 2.90e-121
choline/carnitine/betaine transporter; K02168 high-affinity choline transport protein similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 271.0
  • Bit_score: 369
  • Evalue 1.20e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Elizabethkingia meningoseptica → Elizabethkingia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 828
ATGATGAAAAAATTACCAAAAATCAGAACGACATTAAATAAAGGAGTGGTAATACCGAGTTTGGTTTTCATCATCGGTATTTGCCTTTTGGCCGGAATTTTTCCAAATCTTATGGGTGAACTGCTCCAGAAAGTGAAAGATTTTATTTTCGTAAATCTCAATTACATCTACATTTGGTCGGTAACGATCTTTGTCATTTTTCTTATTTATTTGATGTTCAGCAAGTATGGCAACATCCGCCTTGGCCGAAACGACAGCAAGCCAGACTACTCGTTTTTTTCATGGATTTCGATGCTTTTTGCGGCAGGAATGGGAATTGGTTTGATGTATTTTGGTGTGGCAGAACCGATGCAGCATTACTCCAATCCGGCATTTGCCGATGGAACACCGATTCAGCGAGCCAAAGTTGCCGAAGTGTATACTTTTTTCCATTGGGGAATTCACGCTTGGGCAATTTACGGCATTGTGGGACTTTCGTTGGCGTATTTCACGTACCGGTATCGGTTGCCGCTTTCCCTCAGGAGTTGTTTTTATCCTTTATTGAAAGATAAAATAAAAGGAAAATGGGGCAATGTGATCGATGTTTTTGCTTTGTGCAGTACCTTTTTCGGGATCACCACTTCGTTAGGATTTGGCGTGGTACAGATCAATTCCGGATTGCAGACGCTGGGAGTTTTGCCGGGAACTGGGTTTATTTATCAGGTGTTAATTGTGGTTGTGCTCGTTTCATTTTCCATTTTTTCTGCGGTAAGCGGTGTTGATAAAGGCATCCGGATTTTGAGCAATGTGAACATCATCAGCGTTTTGGCTTTGCTGTTGTTTATTTAG
PROTEIN sequence
Length: 276
MMKKLPKIRTTLNKGVVIPSLVFIIGICLLAGIFPNLMGELLQKVKDFIFVNLNYIYIWSVTIFVIFLIYLMFSKYGNIRLGRNDSKPDYSFFSWISMLFAAGMGIGLMYFGVAEPMQHYSNPAFADGTPIQRAKVAEVYTFFHWGIHAWAIYGIVGLSLAYFTYRYRLPLSLRSCFYPLLKDKIKGKWGNVIDVFALCSTFFGITTSLGFGVVQINSGLQTLGVLPGTGFIYQVLIVVVLVSFSIFSAVSGVDKGIRILSNVNIISVLALLLFI*