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04302015_21_UNK

In projects: 04302015_21
Displaying items 51-100 of 29871 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
04302015_21_scaffold_880
Phylum: Proteobacteria (66.67%)
18 7216 bp 65.74 6.30 95.79
04302015_21_scaffold_115
Order: Rhodospirillales (55.56%)
18 26546 bp 62.29 11.35 90.83
04302015_21_scaffold_900 18 7115 bp 39.56 7.78 88.88
04302015_21_scaffold_776 18 14745 bp 63.02 7.97 89.91
04302015_21_scaffold_376 17 17685 bp 64.89 8.85 94.25
04302015_21_scaffold_639 17 9196 bp 52.41 6.28 96.82
04302015_21_scaffold_432 17 14302 bp 65.34 9.52 89.88
04302015_21_scaffold_433
Genus: Burkholderia (58.82%)
17 13452 bp 60.21 39.41 92.02
04302015_21_scaffold_1066 17 6360 bp 60.13 9.25 75.61
04302015_21_scaffold_240
Species: Acidiphilium multivorum (52.94%)
17 16361 bp 69.59 6.80 95.09
04302015_21_scaffold_515 17 9802 bp 56.56 7.47 91.33
04302015_21_scaffold_263
Class: Alphaproteobacteria (58.82%)
17 20844 bp 58.55 41.35 89.85
04302015_21_scaffold_307 17 13056 bp 36.54 8.16 99.77
04302015_21_scaffold_318 16 12930 bp 58.43 7.78 91.95
04302015_21_scaffold_846 16 7342 bp 40.49 17.86 60.02
04302015_21_scaffold_9847 16 5004 bp 58.51 10.37 99.34
04302015_21_scaffold_1465
Class: Alphaproteobacteria (56.25%)
16 8104 bp 58.70 8.31 77.92
04302015_21_scaffold_388 16 11811 bp 64.69 9.42 88.65
04302015_21_scaffold_2038 16 4407 bp 56.55 4.87 96.80
04302015_21_scaffold_223
Species: Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26 (56.25%)
16 16105 bp 48.28 7.92 97.33
04302015_21_scaffold_762 16 11237 bp 70.50 7.41 86.39
04302015_21_scaffold_2673 15 7116 bp 55.42 6.53 94.48
04302015_21_scaffold_397 15 11573 bp 56.73 7.78 93.79
04302015_21_scaffold_408
Order: Rhodospirillales (73.33%)
15 11933 bp 56.57 31.35 92.87
04302015_21_scaffold_1523 15 12857 bp 65.80 9.21 91.87
04302015_21_scaffold_1013
Class: Alphaproteobacteria (53.33%)
15 10939 bp 69.85 9.35 92.34
04302015_21_scaffold_1040 15 12036 bp 63.13 8.84 89.41
04302015_21_scaffold_453 15 12373 bp 65.00 9.72 83.70
04302015_21_scaffold_999
Class: Alphaproteobacteria (80%)
15 13224 bp 58.61 17.05 75.57
04302015_21_scaffold_273
Class: Betaproteobacteria (53.33%)
15 14150 bp 42.74 15.28 88.45
04302015_21_scaffold_278 15 14525 bp 64.65 7.34 89.37
04302015_21_scaffold_279 15 18875 bp 65.06 7.84 89.40
04302015_21_scaffold_1136 15 6146 bp 63.59 9.54 70.58
04302015_21_scaffold_296 15 13340 bp 64.39 9.82 84.11
04302015_21_scaffold_582
Class: Betaproteobacteria (57.14%)
14 9111 bp 54.99 7.47 87.09
04302015_21_scaffold_330 14 14686 bp 64.86 8.68 89.17
04302015_21_scaffold_346
Phylum: Proteobacteria (50%)
14 12348 bp 62.50 9.49 91.50
04302015_21_scaffold_385
Phylum: Proteobacteria (85.71%)
14 13210 bp 61.26 6.67 95.86
04302015_21_scaffold_1256
Order: Rhodospirillales (71.43%)
14 10796 bp 59.67 17.70 82.06
04302015_21_scaffold_1263 14 5781 bp 54.68 5.29 92.99
04302015_21_scaffold_3452 14 6921 bp 53.49 5.59 86.22
04302015_21_scaffold_2002 14 5349 bp 63.84 7.01 93.83
04302015_21_scaffold_180
Order: Rhodospirillales (64.29%)
14 18718 bp 66.39 13.26 91.28
04302015_21_scaffold_2780 14 6686 bp 67.90 6.17 93.91
04302015_21_scaffold_1285
Class: Alphaproteobacteria (50%)
14 7196 bp 61.06 5.52 85.21
04302015_21_scaffold_459
Species: Acidiphilium multivorum (57.14%)
14 10497 bp 68.15 7.09 87.94
04302015_21_scaffold_475 14 10337 bp 52.96 10.97 94.64
04302015_21_scaffold_235
Order: Rhodospirillales (50%)
14 15481 bp 57.76 29.98 95.58
04302015_21_scaffold_3044 14 5978 bp 60.37 4.77 96.50
04302015_21_scaffold_291 14 13558 bp 63.59 7.92 87.36
Displaying items 51-100 of 29871 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.