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04302015_21_UNK

In projects: 04302015_21
Displaying items 151-200 of 29871 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
04302015_21_scaffold_466 12 12015 bp 62.80 18.68 91.34
04302015_21_scaffold_2819 12 3775 bp 68.11 7.15 99.58
04302015_21_scaffold_1584
Phylum: Parcubacteria (91.67%)
12 6330 bp 57.50 5.88 83.22
04302015_21_scaffold_738
Phylum: Proteobacteria (75%)
12 7948 bp 56.20 16.46 66.05
04302015_21_scaffold_1587 12 7250 bp 58.58 33.02 92.57
04302015_21_scaffold_2575
Phylum: Proteobacteria (50%)
12 8389 bp 56.11 7.12 99.99
04302015_21_scaffold_493
Domain: Bacteria (50%)
12 10109 bp 60.75 5.34 92.28
04302015_21_scaffold_756 12 7794 bp 63.37 121.86 94.65
04302015_21_scaffold_1609
Domain: Bacteria (58.33%)
12 5039 bp 57.81 4.44 78.88
04302015_21_scaffold_509
Genus: Acidithiobacillus (83.33%)
12 9884 bp 51.91 8.23 91.45
04302015_21_scaffold_3045 12 3643 bp 59.54 4.45 83.64
04302015_21_scaffold_1654
Class: Betaproteobacteria (50%)
12 8421 bp 55.35 17.72 94.55
04302015_21_scaffold_2130 12 4314 bp 54.68 7.51 93.46
04302015_21_scaffold_563
Class: Betaproteobacteria (50%)
12 12329 bp 59.53 18.43 87.89
04302015_21_scaffold_568
Genus: Acidithiobacillus (54.55%)
11 9304 bp 53.36 8.13 88.51
04302015_21_scaffold_4850 11 2915 bp 64.67 10.60 96.33
04302015_21_scaffold_6148
Class: Betaproteobacteria (72.73%)
11 5546 bp 39.97 16.82 63.78
04302015_21_scaffold_1433 11 7090 bp 62.60 7.36 93.64
04302015_21_scaffold_1692 11 6657 bp 60.25 6.89 82.60
04302015_21_scaffold_848
Class: Gammaproteobacteria (63.64%)
11 12645 bp 61.19 6.58 92.05
04302015_21_scaffold_1454
Species: Acidiphilium sp. JA12-A1 (63.64%)
11 7366 bp 72.92 9.08 99.38
04302015_21_scaffold_5660 11 5296 bp 59.84 7.25 73.70
04302015_21_scaffold_877
Genus: Acidithiobacillus (54.55%)
11 9284 bp 59.12 9.06 86.86
04302015_21_scaffold_894
Class: Betaproteobacteria (63.64%)
11 7151 bp 42.30 20.51 66.83
04302015_21_scaffold_2234 11 4216 bp 71.13 5.27 85.74
04302015_21_scaffold_1257 11 5797 bp 52.70 4.84 95.95
04302015_21_scaffold_1008 11 7735 bp 66.36 25.17 97.31
04302015_21_scaffold_419 11 11165 bp 64.41 8.95 91.65
04302015_21_scaffold_420
Class: Alphaproteobacteria (63.64%)
11 11165 bp 59.85 5.71 95.36
04302015_21_scaffold_424
Domain: Bacteria (72.73%)
11 11130 bp 61.90 5.69 93.77
04302015_21_scaffold_1785 11 5359 bp 62.79 35.94 86.43
04302015_21_scaffold_1280
Order: Xanthomonadales (63.64%)
11 6101 bp 68.28 9.07 88.66
04302015_21_scaffold_4197 11 3579 bp 58.40 7.63 83.82
04302015_21_scaffold_957 11 6839 bp 61.21 8.42 83.43
04302015_21_scaffold_1039 11 6473 bp 61.66 5.21 70.45
04302015_21_scaffold_2298
Phylum: Parcubacteria (54.55%)
11 7233 bp 59.71 5.14 77.46
04302015_21_scaffold_723
Order: Rhodospirillales (54.55%)
11 8585 bp 61.26 6.06 93.16
04302015_21_scaffold_248 11 15147 bp 64.86 9.57 92.04
04302015_21_scaffold_252
Class: Betaproteobacteria (54.55%)
11 14940 bp 59.19 9.18 91.61
04302015_21_scaffold_6078 11 4473 bp 67.99 7.28 95.37
04302015_21_scaffold_1374 11 5511 bp 58.21 7.87 97.88
04302015_21_scaffold_783 11 7620 bp 64.13 10.04 90.94
04302015_21_scaffold_1121
Phylum: Proteobacteria (54.55%)
11 6192 bp 53.81 11.97 86.43
04302015_21_scaffold_788
Phylum: Parcubacteria (63.64%)
11 7594 bp 57.14 5.10 87.03
04302015_21_scaffold_543
Phylum: Actinobacteria (54.55%)
11 9502 bp 60.84 6.36 79.06
04302015_21_scaffold_15551 11 4334 bp 64.97 14.61 65.76
04302015_21_scaffold_1404 11 8710 bp 63.33 16.72 98.30
04302015_21_scaffold_306 11 13880 bp 63.55 6.92 89.85
04302015_21_scaffold_2651 11 3883 bp 56.22 7.07 98.35
04302015_21_scaffold_1671
Phylum: Parcubacteria (60%)
10 8714 bp 62.69 6.76 97.67
Displaying items 151-200 of 29871 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.