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SCNpilot_cont_1000_p_scaffold_782_curated

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_782_curated_1
unknown

Not on your lists

comp(92..1615)
DNA (1524bp) protein (508aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_782_curated_2
unknown

Not on your lists

comp(1741..2154)
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_782_curated_3

Not on your lists

comp(2308..3030)
DNA (723bp) protein (241aa)
RNA polymerase sigma factor FliA n=1 Tax=Idiomarina xiamenensis 10-D-4 RepID=K2K2A6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKO10702.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
fliA; flagellar biosynthesis sigma factor; K02405 RNA polymerase sigma factor for flagellar operon FliA
SCNpilot_cont_1000_p_scaffold_782_curated_4
Pseudomonas sp. FeS53a, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3041..3835)
DNA (795bp) protein (265aa)
cobyrinic acid a,c-diamide synthase n=1 Tax=Pseudomonas sp. HYS RepID=UPI00029A9443
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1604022 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FeS53a.;"
flagellar number regulator FleN
SCNpilot_cont_1000_p_scaffold_782_curated_5
Nitrincola sp. AK23, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3801..5198)
DNA (1398bp) protein (466aa)
Flagellar biosynthesis protein FlhF n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KFK0_9GAMM
Flagella-associated GTP-binding protein {ECO:0000313|EMBL:EXJ09323.1}; TaxID=1229521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. AK23.;"
GTPase domain-containing protein
SCNpilot_cont_1000_p_scaffold_782_curated_6
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5211..7301)
DNA (2091bp) protein (697aa)
Flagellar biosynthesis protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJ98_NEPCE
flhA; flagellar biosynthesis protein FlhA; K02400 flagellar biosynthesis protein FlhA
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCNpilot_cont_1000_p_scaffold_782_curated_7
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7311..8435)
DNA (1125bp) protein (375aa)
Flagellar biosynthetic protein FlhB n=6 Tax=Legionella pneumophila RepID=G8UWV4_LEGPN
Flagellar biosynthesis pathway, component FlhB {ECO:0000313|EMBL:AJQ96311.1}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; Gynuella.;" source="Gynuella sunshinyii YC6258.;"
Flagellar biosynthesis protein FlhB
SCNpilot_cont_1000_p_scaffold_782_curated_8
Pseudomonas sp. FeS53a, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8444..9220)
DNA (777bp) protein (259aa)
Flagellar biosynthetic protein fliR n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MPR0_PSEPS
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=1604022 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FeS53a.;"
fliR; flagellar biosynthesis protein FliR; K02421 flagellar biosynthetic protein FliR
SCNpilot_cont_1000_p_scaffold_782_curated_9

Not on your lists

comp(9221..9490)
DNA (270bp) protein (90aa)
flagellar biosynthesis protein FliQ n=1 Tax=Rheinheimera perlucida RepID=UPI00037CFF58
Uncharacterized protein {ECO:0000313|EMBL:KKN91023.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
flagellar biosynthetic protein FliQ; K02420 flagellar biosynthetic protein FliQ
SCNpilot_cont_1000_p_scaffold_782_curated_10
Marinomonas sp. MWYL1, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9494..10237)
DNA (744bp) protein (248aa)
fliP; flagellar biosynthesis protein FliP (EC:3.1.1.3); K02419 flagellar biosynthetic protein FliP
Flagellar biosynthetic protein FliP {ECO:0000313|EMBL:ABR72337.1}; EC=3.1.1.3 {ECO:0000313|EMBL:ABR72337.1};; Flags: Precursor;; TaxID=400668 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas sp. (strain MWYL1).;"
Flagellar biosynthetic protein FliP n=1 Tax=Marinomonas sp. (strain MWYL1) RepID=A6W0V8_MARMS
SCNpilot_cont_1000_p_scaffold_782_curated_11
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10234..10512)
DNA (279bp) protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:AKH20193.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
SCNpilot_cont_1000_p_scaffold_782_curated_12
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10718..11092)
DNA (375bp) protein (125aa)
Flagellar motor switch protein FliN n=1 Tax=Teredinibacter turnerae (strain ATCC 39867 / T7901) RepID=C5BSG1_TERTT
flagellar motor switch protein FliN; K02417 flagellar motor switch protein FliN/FliY
Tax=BJP_IG2158_Methylococcales_50_91
SCNpilot_cont_1000_p_scaffold_782_curated_13
Shewanella pealeana, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11095..12066)
DNA (972bp) protein (324aa)
Flagellar motor switch protein FliM n=1 Tax=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) RepID=A8H2A8_SHEPA
fliM; flagellar motor switch protein FliM; K02416 flagellar motor switch protein FliM
Flagellar motor switch protein FliM {ECO:0000256|PIRNR:PIRNR002888}; TaxID=398579 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella pealeana (strain ATCC 700345 / ANG-SQ1).;"
SCNpilot_cont_1000_p_scaffold_782_curated_14
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12076..12636)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8I2S1_9GAMM
fliL; flagellar basal body-associated protein FliL
Tax=RBG_16_Gammaproteobacteria_57_12_curated
SCNpilot_cont_1000_p_scaffold_782_curated_15
Psychromonas sp. CNPT3, Psychromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12753..13994)
DNA (1242bp) protein (414aa)
Flagellar hook-length control protein n=1 Tax=Psychromonas sp. CNPT3 RepID=M4U6N1_9GAMM
flagellar hook-length control protein
Flagellar hook-length control protein {ECO:0000313|EMBL:AGH82053.1}; TaxID=314282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Psychromonadaceae; Psychromonas.;" source="Psychromonas sp. CNPT3.;"
SCNpilot_cont_1000_p_scaffold_782_curated_16
Bermanella marisrubri, Bermanella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14064..14414)
DNA (351bp) protein (117aa)
Hpt domain protein n=1 Tax=Bermanella marisrubri RepID=Q1N2V9_9GAMM
Hpt domain protein {ECO:0000313|EMBL:EAT12560.1}; TaxID=207949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Bermanella.;" source="Bermanella marisrubri.;"
SCNpilot_cont_1000_p_scaffold_782_curated_17
R_Gammaproteobacteria_60_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14434..14739)
DNA (306bp) protein (102aa)
Anti-anti-sigma regulatory factor n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3HBG4_PSEAC
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_60_43_curated
SCNpilot_cont_1000_p_scaffold_782_curated_18
unknown

Not on your lists

comp(14840..15280)
DNA (441bp) protein (147aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_782_curated_19
Shewanella piezotolerans, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15270..16625)
DNA (1356bp) protein (452aa)
fliI; flagellum-specific ATP synthase (EC:3.6.1.14 3.6.3.14 3.6.3.15); K02412 flagellum-specific ATP synthase [EC:3.6.3.14]
ATPase FliI/YscN {ECO:0000313|EMBL:ACJ28308.1}; EC=3.6.1.14 {ECO:0000313|EMBL:ACJ28308.1};; EC=3.6.3.14 {ECO:0000313|EMBL:ACJ28308.1};; EC=3.6.3.15 {ECO:0000313|EMBL:ACJ28308.1};; TaxID=225849 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella piezotolerans (strain WP3 / JCM 13877).;"
flagellar protein FliI n=1 Tax=Nevskia ramosa RepID=UPI0003B49E30
SCNpilot_cont_1000_p_scaffold_782_curated_20
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16622..17266)
DNA (645bp) protein (215aa)
Flagellar assembly protein FliH n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B103_CLOA9
fliH; flagellar assembly protein FliH
Flagellar assembly protein FliH {ECO:0000313|EMBL:AFS78610.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
SCNpilot_cont_1000_p_scaffold_782_curated_21
Marinomonas profundimaris, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17266..18270)
DNA (1005bp) protein (335aa)
UPI0003D5A033 related cluster n=1 Tax=unknown RepID=UPI0003D5A033
Flagellar motor switch protein FliG {ECO:0000256|PIRNR:PIRNR003161}; TaxID=1208321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas profundimaris.;"
flagellar motor switch protein FliG; K02410 flagellar motor switch protein FliG
SCNpilot_cont_1000_p_scaffold_782_curated_22
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18254..19909)
DNA (1656bp) protein (552aa)
flagellar M-ring protein FliF n=1 Tax=Legionella shakespearei RepID=UPI000368796C
Flagellar M-ring protein FliF {ECO:0000313|EMBL:AKH19544.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
fliF; flagellar MS-ring protein; K02409 flagellar M-ring protein FliF rbh
SCNpilot_cont_1000_p_scaffold_782_curated_23
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19920..20243)
DNA (324bp) protein (108aa)
flagellar hook-basal body protein FliE n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B6A2AC
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
fliE; flagellar hook-basal body protein FliE; K02408 flagellar hook-basal body complex protein FliE
SCNpilot_cont_1000_p_scaffold_782_curated_24
Agarivorans albus, Agarivorans, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20260..21567)
DNA (1308bp) protein (436aa)
Flagellar regulatory protein FleQ n=1 Tax=Agarivorans albus MKT 106 RepID=R9PMU2_AGAAL
Flagellar regulatory protein FleQ {ECO:0000313|EMBL:GAD02674.1}; TaxID=1331007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Agarivorans.;" source="Agarivorans albus MKT 106.;"
two component, sigma54 specific, Fis family transcriptional regulator; K10943 two component system, response regulator FlrC
SCNpilot_cont_1000_p_scaffold_782_curated_25
Moritella viscosa, Moritella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21572..22591)
DNA (1020bp) protein (340aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=80854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Moritellaceae; Moritella.;" source="Moritella viscosa.;"
PAS/PAC sensor signal transduction histidine kinase; K10942 two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
sensor histidine kinase n=1 Tax=Succinivibrionaceae bacterium WG-1 RepID=UPI0002556401
SCNpilot_cont_1000_p_scaffold_782_curated_26
Methylophaga aminisulfidivorans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22710..23738)
DNA (1029bp) protein (343aa)
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domain containing protein n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5SZH5_9GAMM
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domain containing protein {ECO:0000313|EMBL:EGL54733.1}; TaxID=1026882 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga aminisulfidivorans MP.;"
regulatory protein
SCNpilot_cont_1000_p_scaffold_782_curated_27
unknown

Not on your lists

comp(23899..24186)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_782_curated_28
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24179..24583)
DNA (405bp) protein (135aa)
Flagellar biosynthetic protein FliS n=1 Tax=Methylomicrobium album BG8 RepID=H8GMU8_METAL
flagellar protein FliS; K02422 flagellar protein FliS
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCNpilot_cont_1000_p_scaffold_782_curated_29
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24625..26025)
DNA (1401bp) protein (467aa)
Flagellar hook-associated 2-like protein n=2 Tax=Cycloclasticus RepID=K0C4J8_CYCSP
flagellar hook-associated 2-like protein
Flagellar hook-associated 2-like protein {ECO:0000313|EMBL:AFT67438.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticus sp. (strain P1).;"
SCNpilot_cont_1000_p_scaffold_782_curated_30
unknown

Not on your lists

comp(26052..26426)
DNA (375bp) protein (125aa)

This feature has no annotations

Displaying items 1-30 of 40 in total

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