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SCNpilot_expt_1000_bf_scaffold_1731_curated_13

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(10993..12177)

Top 3 Functional Annotations

Value Algorithm Source
Putative oxidoreductase y4hM n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ER52_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 394.0
  • Bit_score: 756
  • Evalue 1.60e-215
  • rbh
Putative oxidoreductase y4hM {ECO:0000313|EMBL:EYR80573.1}; EC=1.-.-.- {ECO:0000313|EMBL:EYR80573.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 394.0
  • Bit_score: 756
  • Evalue 2.20e-215
putative oxidoreductase/dehydrogenase protein similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 394.0
  • Bit_score: 714
  • Evalue 1.60e-203
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1185
ATGGCAATTGAAGGAAGCGCAAGCCAGGCGCGGGAGCGCCGCATCCGGCTCGGCATGGTCGGCGGCGGTTCGGGCGCCTTCATCGGCGGGGTGCACCGCATCGCCGCGCGGCTCGACGATCAATACGAGCTCGTCGCCGGCGCGCTGTCGTCCTCGCCGGAAAGGGCCGAGCAGTCGGCGCGCGAGCTCGGGCTCGACCCGTCGCGTAGCTATGGCAGCTTCAAGGAGATGGCGATCCGCGAGGCCAAGCTGAAGAACGGCATCGAGGCCGTGGCGATCGTCACGCCGAACCACGTGCATTACGAGGCGGCCAGGGAGTTTCTGAAGCGCGGCATCCACGTCATCTGCGACAAGCCGCTGACCTCGACGCTGGCCGACGCGCGCAAGCTGAAGAAGCTCACGGAAGAGAGCGACGCGCTCTTCGTGCTGACGCATAATTACACCGGCTACCCCATGGTCCGGCAGGCCCGGGAGATGATCCAGAACGGCGAGCTCGGCGCGATCCGCCTCGTGCAGATGGAATATCCGCAGGACTGGCTGACCGAGGACATCGAGAGCAGCGGCCAGAAGCAGGCCGCCTGGCGCACGGACCCCACCAAGTCCGGCGCGGGCGGCTCTACCGGCGATATCGGCACGCATGCCTACAATCTCGGCTGCTTCGTTTCCGGCCTCGAACTGGAAGAGCTTGCCGCCGACCTCGACAGCTTCGTGCCGGGCCGCAGGCTGGACGACAACGCCCATGTCATGATGCGCTTCAAGGAGAAGGACGGCGTGCGGGCCAAGGGCACGCTCTGGTGCAGCCAGGTCGCGCCCGGCCACGAGAACGGCCTGAAGGTGCGCGTCTATGGCACGAAGGGCGGCCTCGAATGGGTGCAGGCCGATCCGAACTATCTCTGGTACACGCCGTTCGGCGAGCCGAAGCGTCTCATCACGCGGGGCGGTGCGGGCTCCGGCCCCGCCGCCGCCCGCGTCAGCCGCGTACCCTCCGGCCACCCGGAAGGCTATCTCGAAGGCTTCGCCAACATCTATTCCGAAGCCGCGCGCGCCATCCACGCCAAGCGCAATGGCAGCAAGGTCGACCCCGCCGTCACCTATCCGACCGTCGACGACGGCCTCAAGGGCATGCTCTTCGTCGATGCCTGCGTGCAGTCCTCGAAGCGGAACGGGGCCTGGGTGAAGGTCTGA
PROTEIN sequence
Length: 395
MAIEGSASQARERRIRLGMVGGGSGAFIGGVHRIAARLDDQYELVAGALSSSPERAEQSARELGLDPSRSYGSFKEMAIREAKLKNGIEAVAIVTPNHVHYEAAREFLKRGIHVICDKPLTSTLADARKLKKLTEESDALFVLTHNYTGYPMVRQAREMIQNGELGAIRLVQMEYPQDWLTEDIESSGQKQAAWRTDPTKSGAGGSTGDIGTHAYNLGCFVSGLELEELAADLDSFVPGRRLDDNAHVMMRFKEKDGVRAKGTLWCSQVAPGHENGLKVRVYGTKGGLEWVQADPNYLWYTPFGEPKRLITRGGAGSGPAAARVSRVPSGHPEGYLEGFANIYSEAARAIHAKRNGSKVDPAVTYPTVDDGLKGMLFVDACVQSSKRNGAWVKV*