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SCNpilot_expt_1000_bf_scaffold_16359_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1569..3122)

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein n=1 Tax=Rhizobium gallicum RepID=UPI00035D1031 similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 506.0
  • Bit_score: 644
  • Evalue 1.10e-181
Chemotaxis protein {ECO:0000313|EMBL:AHF87246.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.4
  • Coverage: 506.0
  • Bit_score: 634
  • Evalue 9.60e-179
mcpZf1; methyl-accepting chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 66.6
  • Coverage: 506.0
  • Bit_score: 632
  • Evalue 1.10e-178

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1554
ATGGCGCGTTTTACCATGGCGTCGTCCGAGCATAACTTGCAGCGGCTGCTCCAGGAATTCGCCGGCGTACGCCGCGATCTCGACACCCTGGAGAAGACTGCGGGCGAGTTTCAGCATTTTGGTGGCCTTAAAGGTAAAATGCTCCCGGCGCTTGACGTCATCGAGAAGGCTGGCGCTGAGCTCGTCAAGGCGAATGATCAGCGTCTGAACGAGTTCACGGCTTCCGCCGTCGACCTGGATCAGACATGGCAGCAATTGACCGCATATGCGGAGCTTCAGCGGCAGACCGCGGCGGCCGAGCGGCGCGGTGCGAATTCCATCTCCGCGGGGGCGATAAGCCTTGGTATAGCCATCTCGGTTCTCGCCGGTATCGGATTGACCCTGACGTTCAAGGGGCCGATCAGCCAGATCACCGGAGCCATGCGCCGTCTGGCGGAGGGCAAGCTCGAAACCGCAATCGTCGGCGACAACCGTATCGACGAGATCGGCGACATGGCCCGTGCGCTGGGCGTCTTCAAGAACAACGCGCTTGCAAAGGTCGAGATCGAGGAACGAAGCAATGCCGAGAGGGCGAAAGCCGAAGAGGAGCGTCTGCGGAACGATGCCGACAAGCGGGAGGTGGAACGTCAGATTGACTTTGCGGTCAGCGCGCTTGCGGAGGGGCTGGAGCGCCTGGCGCATGGCGATATTTCCCACACGATCGAAACGCCGTTCTTCGGCCGCCTCGAACAGCTGCGAACCGACTTCAATTCCTCCCTTCTACGGCTTCAGGATACCGTGACGCAGATTCGCTCGAACNNNNNNNNNNNNNNNNNNNCCGGCGAAATGAGCCTCTCGGCCGTTGATCTCGCAAGGCGAACTGAGCAACAGGCAGTAGCGCTGGAGAAGGTAGCCGCTGCGGTCGAGCAAATCACCGCGACGGTCAGGGCGTCCGCTGTGCAGGCGGAGGAAGCCAATCAGATCATCGCGGAAACGAAACGCACGGCAGACGCCTCCTCGGAAGTCGTCGTCAGTGCGATCGACGCGATGGCGAAAATCGAGGAGGCATCGACGCAGATCGTTCAGATCATCGCTGCGATCGATGAAATCGCTTTCCAGACGAATCTGCTCGCGTTGAATGCGGGTATCGAGGCTGCCCGGGCAGGCGAGGCGGGCAAGGGCTTTGCGGTCGTTGCGCAGGAAGTGCGCGAGCTTGCCCAGCGATCCGCGGATGCCGCGCAGGAAATTAAGGAGCTGATTGCGAGATCAAATGCGGAAATCGTCTCCGGAGCGCGCGTCGTCCAGGAAACCAGTTCGTTACTCAGTGCGATCTCGTCAAAAGTCGTGACCGTTTCCCAGCAGATGGCGGTGATCGCCCGAGCCAGCCGGGAACAGTCGACGGCGCTTGACGAGGTGAATGCGTCGATCAACACCATGGATCAGATGACGCAGCAGAACGCGGCCATGGTGGAGGAGACGAATACGGCCACCAGTCATCTTNNNNNNNNNNNNNNNNNNNNNNACCAAGGCGCTGATGTCGTTGGTGGCGCAGTTCAACTTGCCCGAGGCAAATGA
PROTEIN sequence
Length: 518
MARFTMASSEHNLQRLLQEFAGVRRDLDTLEKTAGEFQHFGGLKGKMLPALDVIEKAGAELVKANDQRLNEFTASAVDLDQTWQQLTAYAELQRQTAAAERRGANSISAGAISLGIAISVLAGIGLTLTFKGPISQITGAMRRLAEGKLETAIVGDNRIDEIGDMARALGVFKNNALAKVEIEERSNAERAKAEEERLRNDADKREVERQIDFAVSALAEGLERLAHGDISHTIETPFFGRLEQLRTDFNSSLLRLQDTVTQIRSNXXXXXXXGEMSLSAVDLARRTEQQAVALEKVAAAVEQITATVRASAVQAEEANQIIAETKRTADASSEVVVSAIDAMAKIEEASTQIVQIIAAIDEIAFQTNLLALNAGIEAARAGEAGKGFAVVAQEVRELAQRSADAAQEIKELIARSNAEIVSGARVVQETSSLLSAISSKVVTVSQQMAVIARASREQSTALDEVNASINTMDQMTQQNAAMVEETNTATSHLXXXXXXXXQGADVVGGAVQLARGK*