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SCNpilot_expt_1000_bf_scaffold_4159_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 2682..3140

Top 3 Functional Annotations

Value Algorithm Source
Putative peptidoglycan-binding LysM domain-containing protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U3H1_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 150.0
  • Bit_score: 254
  • Evalue 7.50e-65
Putative peptidoglycan-binding LysM domain-containing protein {ECO:0000313|EMBL:EGP58382.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 150.0
  • Bit_score: 254
  • Evalue 1.00e-64
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 150.0
  • Bit_score: 249
  • Evalue 7.50e-64

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGGGTCTCTTCAGCTTTATCAAGAACGCCGGCAAGAAGCTCGGAATCGGCGGCGACGATGACGCGCCCGACGCGGAGGCGGTGAAGAAGGAACTGGAATCGCACGGTCTCGGCACCGACCAGGTGCAGGTCGAGGTGGTCGACGACAAGGTCGTCCTGAAGGGCAGCGTCGCGGACCAGGCCGTCTTCGAGAAGGCGATCGTCGCCGTCGGCAACACGCTCGGCGTTTCCAAGGTCGATACCGAGGCGCTCGCCGTGGCGGCCGCTCCGGCCAAGGAGCCGGTCTTCTATACGGTCAAGAAGGGCGACAATCTCTGGAAGATCGCCGAATCGCAGTACGGCAAGGGCAAGGGCGCCAAGCACACGGTGATCTTCGACGCCAACCGCCCGATGCTGTCCCACCCGGACAAGATCTATCCCGGCCAGGTGCTGCGCATCCCGGATCTCGCGGAAGCGTGA
PROTEIN sequence
Length: 153
MGLFSFIKNAGKKLGIGGDDDAPDAEAVKKELESHGLGTDQVQVEVVDDKVVLKGSVADQAVFEKAIVAVGNTLGVSKVDTEALAVAAAPAKEPVFYTVKKGDNLWKIAESQYGKGKGAKHTVIFDANRPMLSHPDKIYPGQVLRIPDLAEA*