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SCNpilot_expt_1000_bf_scaffold_4631_curated_9

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 6528..6995

Top 3 Functional Annotations

Value Algorithm Source
Sensor protein FixL n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQD1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 155.0
  • Bit_score: 270
  • Evalue 7.90e-70
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 155.0
  • Bit_score: 270
  • Evalue 1.10e-69
PAS/PAC sensor signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 158.0
  • Bit_score: 121
  • Evalue 2.40e-25

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 468
ATGGAGGAGGAGGACGGGCCGATCGACCTCCGGCGGCTCGTCGGCGAGGCGGCCGACGCGCTGTCGCATCTCGACGACGTCAGGAGGATCCGCATCGAAAATCATGTGCCGCCGGAATTGACAATCGTCAGCAAGCCGTCGAAATTCCAGGTCATCGTCGGCAACATGCTGTCCAACGCGGTCAAGTACCACGACCCGAAGGAGGCCGAGCCGAGGATCGACATCCGCGCCTTCCGCCATGCCGGCAAGCTGCGGCTGACGGTGGAGGACAACGGCCTGGGCATCCCGCCCGCCAGCCGCCACCTGTTGTTCCAGATGTTCAAACGGTTGCACCCGAACCGGTCCTTCGGCAGCGGGCTCGGCCTCTACATATTGAAAAAGACCGCGCAATCCCTCGGTGGGACCGCGTTTTACGAAGCAAGGGACAAGGGCAGCCGCTTCATCATCGAACTGCCCGATGGGGAATGA
PROTEIN sequence
Length: 156
MEEEDGPIDLRRLVGEAADALSHLDDVRRIRIENHVPPELTIVSKPSKFQVIVGNMLSNAVKYHDPKEAEPRIDIRAFRHAGKLRLTVEDNGLGIPPASRHLLFQMFKRLHPNRSFGSGLGLYILKKTAQSLGGTAFYEARDKGSRFIIELPDGE*