ggKbase home page

scnpilot_solids1_trim150_scaffold_21_134

Organism: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 150356..150955

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T2F8_LEIAQ similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 193.0
  • Bit_score: 228
  • Evalue 4.40e-57
HTH-type transcriptional regulator EthR {ECO:0000313|EMBL:KJL17479.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 199.0
  • Bit_score: 310
  • Evalue 2.10e-81
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 198.0
  • Bit_score: 170
  • Evalue 5.80e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGCCTGCAGAGCGCCGCGCCCGACTCACCCCGGACCAGCGCCGAGCCCAGCTCATCGCCGTGGGCGTGAACTTCCTCGCCGATCACACCCTCGACGAGCTGACGATGGAGGCGCTGGCGCAGCAGGCCGGTGTGTCGCGTCCGCTCGTGTTCCACTACTTCGACACGCGTCAGGGCATGCACCTCGCGGTGATCGCCACCGCCAGGGACAGCCTTCTGCAGGCCACCGAGCCCCGTCCGGACCTCCCGCCGCACGAGCGGCTCCGCGACACGCTGATGCGCATCGCCGACTTCGTGCAGCAGCACCAGGGCACGTTCCACTCGCTGGTGCGGGGCATCGCCAGCGGGGACTCCGCCGTGCGAGCCGTGGTGGACGAATCGCGCGTGCGCAACGCCGAGCGTCTCGTGGAGGCGTTCACGGAGCTCGGCACCCCCGACTCCCCCGCGCTGCGCATGGCGCTGCGCGCCTGGGTGGCGTTCACCGAGGAGACGCTGATCAGCCTGCTCGTCGAGCGCGACACGCCGCCTGCTGACGTCGTGCGCTTCCTGGTGGGCACGCTCGACGGCGTGGTCGCCTCGGCCGGAGAGCTCGATCTCTGA
PROTEIN sequence
Length: 200
MPAERRARLTPDQRRAQLIAVGVNFLADHTLDELTMEALAQQAGVSRPLVFHYFDTRQGMHLAVIATARDSLLQATEPRPDLPPHERLRDTLMRIADFVQQHQGTFHSLVRGIASGDSAVRAVVDESRVRNAERLVEAFTELGTPDSPALRMALRAWVAFTEETLISLLVERDTPPADVVRFLVGTLDGVVASAGELDL*