ggKbase | organisms

Consensus taxonomy: Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Metagenomic Context

Parent: SCNPILOT_SOLID_1_TRIM150_UNK Curated version: solids_Flavobacteriales_1

Properties

Avg. coverage: 3.98 Longest contig: 8.96 Kbp Bin length: 1.35 Mbp GC content: 39.55 %

Contigs count: 814 Features count: 1745 rRNAs count: 0 tRNAs count: 8

Genome completeness

partial RP 15 / 55 BSCG 13 / 51 ASCG 2 / 38

Displaying items 301-350 of 814 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
scnpilot_solids1_trim150_scaffold_30685 Species: Imtechella halotolerans (50%)	2	1297 bp	34.93	2.54	100.15
scnpilot_solids1_trim150_scaffold_25590 Species: Nonlabens dokdonensis (50%)	2	1478 bp	33.76	4.87	100.68
scnpilot_solids1_trim150_scaffold_37976 Species: Flavobacterium sp. EM1321 (50%)	2	1109 bp	48.42	3.52	86.56
scnpilot_solids1_trim150_scaffold_19840 Species: Fluviicola taffensis (50%)	2	1771 bp	36.98	4.66	94.18
scnpilot_solids1_trim150_scaffold_18504 Species: Flavobacterium enshiense (50%)	2	1857 bp	44.59	4.28	93.70
scnpilot_solids1_trim150_scaffold_34233 Species: BJP_IG2102_Flavobacteriales_34_12 (50%)	2	1197 bp	37.43	4.01	90.48
scnpilot_solids1_trim150_scaffold_34490 Species: Capnocytophaga sp. oral taxon 338 (50%)	2	1191 bp	33.25	3.27	90.93
scnpilot_solids1_trim150_scaffold_21898 Species: Flavobacterium sp. 316 (50%)	2	1652 bp	43.70	4.36	96.79
scnpilot_solids1_trim150_scaffold_20971 Species: Myroides profundi (50%)	2	1702 bp	39.25	3.70	85.31
scnpilot_solids1_trim150_scaffold_34235 Species: Flavobacterium hydatis (50%)	2	1197 bp	45.45	2.76	90.23
scnpilot_solids1_trim150_scaffold_31355 Species: Flavobacterium sp. EM1321 (50%)	2	1276 bp	44.91	2.82	98.75
scnpilot_solids1_trim150_scaffold_21132 Species: Flavobacterium enshiense (50%)	2	1693 bp	38.04	3.72	99.76
scnpilot_solids1_trim150_scaffold_35701 Species: Chryseobacterium soli (50%)	2	1161 bp	44.70	3.62	88.11
scnpilot_solids1_trim150_scaffold_16885 Species: Flavobacteriales bacterium BRH_c54 (50%)	2	1982 bp	44.35	3.48	99.75
scnpilot_solids1_trim150_scaffold_18253 Species: R_Fluviicola_43_260 (100%)	2	1876 bp	39.45	3.84	78.04
scnpilot_solids1_trim150_scaffold_39479 Species: Fluviicola taffensis (100%)	2	1078 bp	35.62	3.48	99.07
scnpilot_solids1_trim150_scaffold_17303 Species: Fluviicola taffensis (50%)	2	1949 bp	37.40	3.77	79.12
scnpilot_solids1_trim150_scaffold_33065 Species: Flavobacterium hydatis (50%)	2	1227 bp	52.73	3.42	99.51
scnpilot_solids1_trim150_scaffold_41369 Species: Elizabethkingia sp. BM10 (50%)	2	1040 bp	40.87	2.88	95.48
scnpilot_solids1_trim150_scaffold_21905 Species: Chryseobacterium soli (50%)	2	1652 bp	35.65	4.18	37.95
scnpilot_solids1_trim150_scaffold_37475 Species: Chryseobacterium sp. StRB126 (50%)	2	1120 bp	47.95	3.35	96.96
scnpilot_solids1_trim150_scaffold_21651 Species: Fluviicola taffensis (50%)	2	1664 bp	38.58	4.15	100.06
scnpilot_solids1_trim150_scaffold_26052 Species: Fluviicola taffensis (50%)	2	1459 bp	38.18	4.11	70.94
scnpilot_solids1_trim150_scaffold_25092 Species: Elizabethkingia meningoseptica (50%)	2	1499 bp	38.09	2.80	81.85
scnpilot_solids1_trim150_scaffold_19341 Species: Fluviicola taffensis (50%)	2	1801 bp	41.14	3.91	86.12
scnpilot_solids1_trim150_scaffold_32782 Species: Chryseobacterium indologenes (50%)	2	1235 bp	40.81	2.91	96.92
scnpilot_solids1_trim150_scaffold_25606 Species: R_Fluviicola_43_260 (50%)	2	1478 bp	34.71	2.44	80.38
scnpilot_solids1_trim150_scaffold_32527 Species: Fluviicola taffensis (50%)	2	1242 bp	35.59	2.90	98.55
scnpilot_solids1_trim150_scaffold_11951 Species: Flavobacteriales bacterium BRH_c54 (100%)	2	2542 bp	37.69	3.95	93.47
scnpilot_solids1_trim150_scaffold_31369 Species: Elizabethkingia miricola (100%)	2	1275 bp	37.49	4.24	99.29
scnpilot_solids1_trim150_scaffold_27994 Species: Fluviicola taffensis (50%)	2	1384 bp	35.84	2.60	74.78
scnpilot_solids1_trim150_scaffold_38258 Species: R_Fluviicola_43_260 (50%)	2	1103 bp	35.18	3.54	81.60
scnpilot_solids1_trim150_scaffold_10203 Species: Capnocytophaga sp. CM59 (50%)	2	2848 bp	42.94	4.27	82.27
scnpilot_solids1_trim150_scaffold_10717 Species: Nonlabens dokdonensis (50%)	2	2744 bp	34.80	5.19	100.69
scnpilot_solids1_trim150_scaffold_40670 Species: Psychroflexus gondwanensis (50%)	2	1055 bp	34.31	4.27	96.11
scnpilot_solids1_trim150_scaffold_40926 Species: Flavobacterium sp. 316 (50%)	2	1050 bp	35.71	3.43	99.14
scnpilot_solids1_trim150_scaffold_37230 Species: Muricauda lutaonensis (50%)	2	1126 bp	36.77	4.13	93.25
scnpilot_solids1_trim150_scaffold_16646 Species: Elizabethkingia miricola (50%)	2	2002 bp	38.01	5.69	65.63
scnpilot_solids1_trim150_scaffold_42439 Species: Flavobacterium sp. 316 (50%)	2	1022 bp	36.89	2.79	80.14
scnpilot_solids1_trim150_scaffold_23839 Species: Fluviicola taffensis (100%)	2	1554 bp	44.08	3.28	99.42
scnpilot_solids1_trim150_scaffold_31631 Species: Flavobacterium sp. KMS (50%)	2	1268 bp	50.63	3.55	99.61
scnpilot_solids1_trim150_scaffold_29679 Species: BJP_IG2102_Flavobacteriales_34_12 (50%)	2	1327 bp	39.04	4.63	88.62
scnpilot_solids1_trim150_scaffold_35976 Species: Flavobacterium johnsoniae (50%)	2	1154 bp	47.83	2.99	83.45
scnpilot_solids1_trim150_scaffold_41385 Species: R_Fluviicola_43_260 (50%)	2	1040 bp	37.79	4.62	80.77
scnpilot_solids1_trim150_scaffold_42698 Species: Chryseobacterium sp. JM1 (100%)	2	1017 bp	42.08	3.54	100.30
scnpilot_solids1_trim150_scaffold_25875 Species: Fluviicola taffensis (50%)	2	1466 bp	40.45	3.68	99.66
scnpilot_solids1_trim150_scaffold_28507 Species: Flavobacterium psychrophilum (50%)	2	1366 bp	38.29	4.17	73.57
scnpilot_solids1_trim150_scaffold_37749 Species: Chryseobacterium sp. CF314 (50%)	2	1114 bp	41.11	2.96	98.83
scnpilot_solids1_trim150_scaffold_29685 Species: Epilithonimonas sp. FH1 (50%)	2	1327 bp	46.65	2.60	92.69
scnpilot_solids1_trim150_scaffold_25877 Species: Chryseobacterium formosense (50%)	2	1466 bp	31.99	2.86	99.45

Displaying items 301-350 of 814 in total

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_40_4

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_40_4

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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